Phodopus roborovskii (desert hamster): 127232822
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Entry
127232822 CDS
T08852
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00310
Lysine degradation
prob01100
Metabolic pathways
prob04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127232822 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
127232822 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127232822 (Setdb1)
Enzymes [BR:
prob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
127232822 (Setdb1)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127232822 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
127232822 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
MBD
SET
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
127232822
NCBI-ProteinID:
XP_051055060
UniProt:
A0AAU9ZVI1
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MSSLPGCISLDAATAAADSEDITELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVLQKESEVAYVDQLLDDASRAVINCESLVKDFYSKLGLQYHDSSSEDEASQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLGQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGLGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDSSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASAMEKKQGGQFRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPIAPPAPPAALPLSPQAGDSESLESQL
AQSRKQVAKKSTSFRPGSVGSGHSSPASPTLSENVTAGKLGINQTFRSPLASVTSTPTPA
APPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRPMRNEQYRGKNPLLVPLLY
DFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLV
DRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFL
VGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCK
CDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEG
LEMGDEYFANLDHIESVENFKEGYESDVASSSDSSGVDMKDQEDGNSGSEDPEESNDDSS
DDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEVASKDSRPPDLGPPHVPVPPSGSVG
GCKPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGDGRTGAGRAEAEKAST
SGLSFKDEGDNKQTKKEDPDDRNKMSVVTESSQNYGHNPPMKSEGLRRPSSKTSMPTSRR
LVASTQSNPDDILTLSSSTESEGESGISRKPTAGQTSATAVDSDDIQTISSGSDGDDFED
KKNLSGPTKRQVAVKSTRGFALKSTHGIAVKSTNMAPVDKGESAPVRKNTRQFYDGEESC
YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNY
EVGSVEGKELLCCCGAIECRGRLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctcccggggtgcattagtttggatgcagcaacagctgcagctgactctgaa
gacattactgagctgcagcaggcggtggttgaagagctgggcatctctatggaggaactt
cgtcaattcattgatgaagagctggagaagatggactgtatacagcagcgcaaaaagcag
ctagcagagctggagacgtgggtgctacagaaggagtctgaggtggcttatgtggaccag
ctccttgacgatgcgtccagggcagtgattaattgtgagtctttggtgaaggatttctac
tctaagctgggactgcagtatcatgacagtagctccgaggatgaagcttcccagcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgagaagctatggctgccttaagaaaatca
gctcaagatgtccagaagttcatggatgctgtcaacaagaaaagcagttcccaggatcta
cataaaggaaccttgggtcagatgtctggagaactgagcaaagatggggacctgatagtc
agcatgcggattctgggcaagaagaggactaagacatggcacaaaggcacccttattgcc
atccagactgttgggctaggaaagaaatacaaagtgaaatttgacaacaaaggaaagagt
ctgctgtctggcaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaagatggaaatcaggtctggctttatgctggcatt
gtagctgagacccccaacgtcaagaacaagctcagatttctgattttctttgatgatggt
tatgcctcctatgtcactcagtcagaactgtatcccatttgccgaccattgaaaaagact
tgggaagacatagaggacagctcctgccgagacttcatagaggaatatatcactgcctac
ccaaaccgccccatggtacttctcaagagtggccagcttatcaagacagagtgggaaggc
acatggtggaaatctcgagttgaagaggtggatggcagcctagtcaggatcctctttctg
gatgacaaaagatgtgagtggatctatcgaggttctacacgcctggaacccatgttcagt
atgaagacatcgtcagcttctgcaatggagaagaagcaagggggacaattcagaacccgt
cctaatatgggtgctgtgaggagcaaaggtcctgttgttcagtatacgcaggacctaacc
agcactggaacccagttcaagcccatggagcccccacagcccatagctccaccagcccca
cccgctgcacttcctctttccccacaagcgggtgactctgaaagcttagaaagccaactt
gctcagtcacggaaacaagtggccaaaaagagcacatcgtttcggccaggatctgtgggt
tctggccattcctctcctgcttcgcccacactcagtgaaaatgtaactgctgggaaactt
ggaatcaaccagacattcagatctcctttggcctcagtaacatctaccccaacacctgca
gcccctcctgctttccatggcatgttagagcgggcaccggctgagccttcctaccgagcc
cccatggagaagcttttctatttacctcatgtctgcagttacacttgtctgtcccggatc
agacccatgaggaatgaacagtaccgtggcaagaatcccctcttagtaccgctactatat
gacttccgtaggatgacagcccgccgaagagttaaccgaaaaatgggctttcatgttatc
tataagacaccttgtggtctctgtcttcggacaatgcaggagatagaacgctaccttttt
gagactggctgtgacttccttttcctggagatgttctgtttggatccatatgttcttgtt
gacagaaagtttcagccttttaagcctttttactatattttggacattacctacggcaag
gaagatgttcccctttcctgtgttaatgagattgacacaactcccccaccccaagtggcc
tacagcaaggagcgcatccctggcaagggtgttttcattaacacaggccctgaatttctg
gttggctgtgactgcaaggacgggtgtcgggataaatccaaatgtgcctgccatcagcta
actatccaagccacagcatgtaccccagggggccaaatcaaccctaactctggctaccag
tacaaaagactagaagagtgtctgcccacaggggtttatgagtgtaacaaacgatgcaaa
tgtgacccaaacatgtgcacaaatcggttggtgcagcatggactacaggttcgactacag
ctttttaagacgcagaacaagggctggggtatccgctgcttggatgacattgccaaaggc
tcttttgtctgtatttatgcaggcaaaatcctgacagatgattttgcagacaaagaaggg
ctggagatgggtgatgagtactttgcaaatctggaccacattgaaagtgtggagaacttt
aaggaaggatatgagagtgatgttgccagttcctctgacagcagtggggtagacatgaag
gaccaggaagatggcaacagtggttcagaggatcctgaagaatccaatgatgacagctct
gatgataacttctgtaaggatgaggacttcagcaccagttcagtgtggcgtagctatgct
acccggagacaaactcggggtcagaaggagaatggactgtctgaggtggcttccaaggac
tctcgccctccagaccttgggcctccacatgttcctgtccctccttcaggatctgtaggg
ggctgcaagccaccttcatctgaagagacccccaagaacaaggtggcctcatggttgagc
tgcaatagtgtcagtgaaggtggatttgctgattctgacagccgttcttccttcaagact
agtgagggtggagatggccgaactggggcaggccgggcagaagctgagaaggcctctacc
tcaggattgagcttcaaggatgaaggagacaataagcagactaagaaagaggaccctgat
gaccgaaacaagatgtcagtagttactgaaagctctcagaattatggacacaatcctccc
atgaagtctgaagggcttcgccgaccatctagtaaaacttctatgcccacaagtcgtcga
cttgtggcttctactcagtccaaccctgatgatatcctgacactgtccagcagcacagaa
agtgaaggggaaagtggaatcagccgaaagcccactgctggtcagacttcagcaacagct
gttgacagtgatgacatccagaccatctcttctggctctgacggtgatgactttgaggac
aagaagaacttgtctggtccaacaaagcgccaagtggcagtaaaatcaacccgaggcttt
gctcttaaatcaacccatggaattgctgttaaatcaaccaacatggctcccgtggacaag
ggggagagtgcaccagttcgtaagaacacacgccagttctatgacggtgaagagtcttgc
tacatcatcgatgccaaacttgaaggcaacctaggccgctacctcaatcacagttgcagc
cccaacctgtttgtccagaatgtctttgtggatactcatgatcttcgcttcccttgggtg
gctttctttgccagcaagagaatccgcgctggaacagaacttacttgggactacaactac
gaagtgggcagtgtggaaggcaaagagctgctgtgctgctgtggggccattgagtgcaga
gggcgtcttctttaa
DBGET
integrated database retrieval system
