Phodopus roborovskii (desert hamster): 127232929
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Entry
127232929 CDS
T08852
Symbol
Mmp13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04657
IL-17 signaling pathway
prob04926
Relaxin signaling pathway
prob04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
127232929 (Mmp13)
09152 Endocrine system
04926 Relaxin signaling pathway
127232929 (Mmp13)
04928 Parathyroid hormone synthesis, secretion and action
127232929 (Mmp13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127232929 (Mmp13)
Peptidases and inhibitors [BR:
prob01002
]
Metallo peptidases
Family M10
127232929 (Mmp13)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Motif
Other DBs
NCBI-GeneID:
127232929
NCBI-ProteinID:
XP_051055212
UniProt:
A0AAU9YQ74
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MHSAVLATLFLLSWTHCWSLPLPSGDDDDDLSEEDLEFAEHYLKSFYHPVTLAGILKKSA
VTSTVDRLREMQSFFGLKVTGKLDDPTLDIMKKPRCGVPDVGEYNVFPRTLKWSHTNLTY
RIVNYTPDMPHSEVEKAFKKAFKVWSDVTPLNFTRIHDGTADIMISFGTKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFIVAAHELGHSLGLDHSKDPGALM
FPIYTYTGKSHFVLPDDDVQGIQSLYGPGDEDPNPKHPKTPEKCDPALSLDAITSLRGET
MIFKDRFFWRLHPQQVEAELFLTKSFWPELPNHVDAAYEHPSRDLMFIFRGRKFWALNGY
DILEGYPKKISDLGFPKEVKRISAAVHFEDQGKTLFFSGNQVWRYDDANQTMDRDYPRFI
EEEFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSLLWC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcattcagctgtcctggccactctcttcttgttgagctggactcactgttggtccctg
ccccttcccagtggtgatgacgatgatgacttgtctgaggaagacctggagtttgcagag
cactatctgaagtcattctatcaccctgtgactctggcgggcatcctgaaaaagtctgca
gtgacctccacagtcgatcggcttcgagagatgcagtctttctttgggctgaaggtgact
ggcaaacttgacgaccccaccttagatatcatgaagaaaccaagatgtggagtccccgat
gtgggtgaatacaatgttttccctcgaactctcaaatggtctcacaccaacttaacttac
agaattgtgaactacaccccggacatgccccattctgaagtggagaaggccttcaaaaag
gccttcaaagtctggtctgatgtcacacctctgaatttcaccagaatccatgatggtact
gctgacatcatgatatcttttggaactaaagaacatggtgacttctacccatttgatgga
ccttccggtcttctggcacatgcctttcctcctggaccaaattatggaggggatgcccat
tttgatgatgatgaaacctggacaagtagttccaaaggttacaacttgtttattgttgct
gcccatgagcttggccactccctaggtctggaccactccaaggacccaggagccctgatg
tttcccatctatacctacactggtaaaagccacttcgtgcttcccgatgatgatgttcaa
gggatccagtccctctacggtccaggagatgaagaccccaaccctaaacatcccaaaaca
ccagagaagtgtgacccggccttatcccttgatgccataaccagcctccggggagaaacc
atgatctttaaagacaggttcttctggcgcctgcatcctcagcaggtcgaggcagagctg
tttttgacaaaatcattttggccagaacttcccaaccatgtggatgctgcatatgagcat
ccatcccgtgaccttatgttcatctttagaggtaggaaattctgggctctcaatggttat
gacattctggaaggttatcccaaaaaaatatctgacctgggatttccaaaggaggtcaag
aggataagcgctgccgtgcactttgaggaccagggcaagaccctcttcttctccgggaac
caggtgtggaggtatgatgatgctaaccagactatggacagagactatccacgattcata
gaagaagaattccccggaatcggtgataaagtagatgctgtctatgagaaaaatggctat
atctactttttcaatgggcccatacagtttgaatacagtatctggagtaatcgcattgtg
cgagtcatgccaacaaattccttgttgtggtgctaa
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