Phodopus roborovskii (desert hamster): 127233301 Help Entry 127233301         CDS       T08852                                  Symbol Slit1 Name (RefSeq) slit homolog 1 protein   KO K06838   slit 1 Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04360   Axon guidance prob04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:prob00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     127233301 (Slit1)  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     127233301 (Slit1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:prob00536]     127233301 (Slit1) Glycosaminoglycan binding proteins [BR:prob00536]  Heparan sulfate / Heparin   Axon guidance molecules    127233301 (Slit1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 LRRNT hEGF LRR_1 LRRCT LRR_9 EGF_TEN LRR_14 EGF_DL_JAG EGF_2 EGF_Teneurin LRR_EndoS FNIP Motif Other DBs NCBI-GeneID:  127233301 NCBI-ProteinID:  XP_051055681 LinkDB All DBs Position Unknown AA seq 1531 aa AA seqDB search MALTPQRGSSSGLSRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP RNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQ LHVLPELLFQNNQALSRLDLSENALQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT QCSGPASLRGLNVAEVQKSEFSCSGQGEASRVPPCTLSSGSCPAMCTCSSGIVDCRGKGL TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQSLSLLSLYDNKIQSL TKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQI KSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLKLSKIPERIPQ STAELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQ LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL QALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQL STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH GNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPDME GKLLLTTPAKKFECQGPPSLAVQAKCDPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRD CEVSLDSCSSNPCGNGGICLTQEGEDAGFTCSCPSGFEGPTCGVNTDDCVKHACVNGGVC VDGVSNYTCRCPLQYTGKTCEQLVDFCSSDLNPCQHEGQCVGTPDGPRCECVPGYTGDNC SENQDNCRDHRCQNGAQCVDGVNSYACLCAEGYSGQLCEIPSAPRSPCEGTECQNGANCV DQGSRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL LYNGDNDHIAVELYQGHVRVSYDPGSHPSSAIYSAETINDGQFHTVELVTFDQMVNLSID GGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNEL QDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPVDGPCHG HKCVHGKCVPLDALAYSCQCQDGYSGALCNQVGAVAEPCGGLQCLHGHCQASATKGAHCV CNPGFSGERCEQESECRGDPVRDFHRVQRGYAICQTTRPLSWVECRGTCPGQGCCQGLRL KRRKLSFECSDGTSFAEEVEKPTKCGCAQCV NT seq 4596 nt NT seq  +upstreamnt  +downstreamnt atggcgctgacgccccagcgcgggtcctcctccgggttgagccgaccggagctgtggttg ctgctgtgggcagccgcgtggcgcctgggggccacggcatgccccgccctctgcacctgt accggcaccaccgtggactgccatggcacggggttacaggccatccccaagaacatcccg cggaacacagagcgcttggagctcaacggcaacaatatcacccgaatccataagaatgac ttcgctgggctgaagcagcttcgagtgctgcagctgatggagaaccagattggagctgtg gaacgtggagctttcgatgacatgaaggagctggagcggctacgactgaaccgcaaccag ctacacgtgttacctgaactactgttccagaacaaccaagctctatcccgactggacctg agtgagaacgccctccaggctgtgcccaggaaggctttccggggagccacagacctcaag aatctacagctggacaagaaccagatcagctgcatcgaggaaggggccttccgtgccctg cggggactagaggttctgaccctgaacaacaacaacataaccaccatccctgtgtccagc ttcaaccacatgcccaagcttcggaccttccgcctgcactccaaccacctgttctgtgac tgtcacctggcctggctctcacagtggctgaggcagaggcccaccatcgggctcttcacc cagtgctccgggcctgccagcctccggggcctcaatgtggcagaagtgcaaaagagcgag ttcagctgctcaggccagggggaggcctcacgagtgcccccctgcaccctctcttccggc tcctgcccagccatgtgcacctgcagcagtggtatcgtggactgccgtggcaaaggcctc actgccatccctgctaacctgcctgagaccatgacggagatccgcctggagctgaatggt atcaaatccatcccgccaggagccttctctccctacagaaagctgcgaaggatagacctg agcaacaaccagattgctgagatcgcacctgatgccttccagggcctccgctccttgaat tctctggttctctatggcaacaagatcacagatctgccccgcggtgtatttggaggcctg tacaccctccagctgctgcttttgaatgccaacaagatcaactgcatccggcccgacgcc ttccaagacctgcagagcctctctctgctctccttgtatgataacaagatacagagtctc accaagggcaccttcacctccctacgagccatccagacactgcatctggctcagaaccct ttcatctgtgactgtaacctcaagtggctggcagacttcttacgtaccaatcccattgag acaagcggagcccgctgtgccagcccccggcgccttgccaacaagcgcattgggcaaatc aaaagcaagaagttccgctgctcagccaaagagcagtacttcattccagggacggaggat taccacctgaacagcgagtgtaccagtgatgtggcctgtccccacaagtgccgttgtgag gccagtgtggtggagtgttccagcctgaagctctccaagatccctgagcgcatcccccag tccacggctgagctacggttgaacaacaatgagatttctatcctagaggccacggggctg tttaagaaactctcacacctgaaaaaaattaacctgagcaacaacaaggtgtcagagatt gaggatgggacgttcgagggtgctgcctccgtcagtgagctgcacttgaccgccaaccag ctggagtccatcaggagcggcatgttccgtggtctagatggcttgcggaccctgatgctg aggaacaaccgcatcagctgcatccacaatgacagcttcacaggactgcgcaatgtgcgg ctcctgtcactttacgacaaccacatcaccaccatctcccctggagccttcgataccctt caggctctgtccacactaaacctcctggccaacccattcaactgcaactgccagctagcc tggctgggtgactggcttcggaagaggaagattgtgacagggaacccacgctgccagaac ccagacttcctgaggcagattcccctgcaggatgtggccttccctgacttcaggtgtgag gaaggccaggaggaggtggggtgcctgcctcgcccacagtgcccccaggagtgcgcctgc ctggacactgtggtcaggtgcagcaacaagcacctccaggctctgcccaagggcatcccc aagaacgtcacagaactctatttggacgggaaccagttcacactggttccgggacagctg tctaccttcaagtatctgcaacttgtggacctgagcaacaacaagatcagttccttaagt aattcttccttcaccaacatgagccagctgaccacgctgatcctcagctacaatgccctc cagtgcatccctcctctggccttccagggcctccgttccctgcgcctgctgtctttgcat ggcaatgatgtctccaccctccaagagggcatctttgcagacgtgacatcactgtctcac cttgccattggtgccaaccccctgtactgtgactgccacctccgatggctctccagctgg gtgaagactggctacaaggaacctggcattgcccgctgtgctggaccacctgacatggag ggcaaacttctgcttaccacacctgccaagaagtttgaatgccaaggtccccccagtctg gcagtccaggccaagtgtgatccctgcttgtccagcccatgccagaatcagggcacctgc cacaatgaccctcttgaggtatacagatgtacctgtcccagtggctacaagggcagagac tgtgaggtgtccctggacagctgttccagcaacccatgtggaaatgggggaatctgcctt acccaggagggcgaggatgcgggcttcacgtgctcctgtccctctggcttcgaagggcca acctgtggagtgaacacagatgactgtgtgaagcatgcctgtgtcaatgggggtgtctgt gtggatggtgtgagcaattacacctgccggtgccccctgcagtacacaggaaagacctgt gagcagctggtggacttctgctcctcagatctgaacccatgtcagcatgagggccagtgt gtgggcaccccggatgggccaaggtgtgagtgtgtgccaggttacacgggtgacaactgc agcgaaaatcaggacaactgcagggatcaccgctgtcagaacggggcccagtgtgtggat ggagtcaacagctacgcctgcctctgtgccgagggctacagcggacagctctgtgagatt ccatctgcccccaggagtccctgtgaggggactgagtgccagaatggggccaactgtgta gaccagggcagccggcctgtgtgccagtgcctgccaggcttcggtggccccgaatgtgag aaattgctcagcgtcaactttgtggaccgagacacttacctacagttcactgacctacag aactggcctcgggccaacatcactctgcaggtatctacagcagaggacaacgggatcctc ctgtacaatggggataatgaccacatcgcagttgagctgtaccagggccatgtccgtgtt agctatgacccaggcagccaccccagctctgctatctacagtgccgagacaatcaacgac gggcagttccacactgttgagctggtcacctttgaccaaatggtgaacctctccatcgat ggcggcagccccatgactatggacaactttggcaagcactacacgctcaacagcgaggcc cccctctatgtgggagggatgcccgtggatgtaaactcagctgccttccgcctctggcag atcctcaatggcaccagcttccacggttgcatccggaatctgtatatcaacaatgaactg caggacttcaccaagacacagatgaagccaggcgttgtgcctggctgcgagccctgccga aagctctactgcctgcatggcatctgccagcccaacgccaccccggggcctgtgtgccac tgtgaggctggctgggggggcctgcactgtgaccagccagtggatggcccctgccacggc cacaagtgtgtccatgggaaatgcgtgccccttgatgcgctagcctacagctgccagtgc caggatgggtactcaggggctctatgcaaccaggtcggggctgtggcagagccctgtggg ggcttgcagtgcctgcacggccactgccaggcctcagccaccaaaggggcacactgcgtg tgcaacccaggcttttcaggcgagcggtgtgagcaagagtccgagtgccggggggaccct gtccgggactttcaccgggtccagaggggctatgccatctgccagaccacgcgcccactg tcgtgggtggagtgccggggcacgtgcccgggccagggctgctgccagggcctccggctg aagcggaggaagctcagcttcgaatgcagcgacgggacttcattcgctgaggaggtggag aagcccaccaagtgcggctgtgcccagtgtgtataa

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