Phodopus roborovskii (desert hamster): 127236257
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Entry
127236257 CDS
T08852
Symbol
Ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
prob03037
]
127236257 (Ift122)
Cilium and associated proteins [BR:
prob03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
127236257 (Ift122)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122
WD40
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
NBCH_WD40
TPR_GEMI5
TPR_IF140-IFT172
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
TPR_IFT80_172
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
B-prop_COPA_B_2nd
TPR_7
WD40_MABP1-WDR62_1st
eIF2A
TPR_COPA_B
Beta-prop_IFT140_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
127236257
NCBI-ProteinID:
XP_051059826
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MRAVLTWRDKVEQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVA
YAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMSNGVISIRNKNGEEKVKIERPGGSLSPIW
SICWNPSSRWENIWMSRENEDAEDVIVNRYFQEIPSILKSTVYSSQGSEAEEEEQEEEDD
SPRDGNSEEHNDILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTKGEYILVGGS
DKQVSLFTKDGVRLGTVGEQNSWVWTCRVKPDSNYVVVGCQDGTISFYQLIFSTVHGLYK
DRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSDDSA
DMHYRVKEKIVKKFECNLLVVCADHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIG
GPAGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCLV
YDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHQQKLQGFVVGYNGS
KIFCLHVFSMSAVEVPQSAPMYQYLDRKMFREAYQIACLGVTDTDWRELAMEALEGLEFE
TAKKAFTRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHDS
LALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYISAGEHIKA
IEISGSHGWVDMLIDIARKLDKAEREPLLMCARYFKKLDSPGYAAETYLKVGDLKSLVQL
YVDTKRWDEAFALGEKHPEFKDDIYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRVLEQ
LTHNAVVESRFNDAAYYYWMLSMQCLDMAQADPAQKDVMLDKFHHFQHLAELYHGYQTIH
RYTEEPFSFDLPETLFNISKFLLHSLTKATPLGISKVNTLFTLAKQSKALGAYKLARHAY
DKLRGLQIPARIQKSIELGTLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQ
PFIFSASSYEVLHLVEFYLEEGISDEEAVALIDLEAPRHKRESKWQEIASNNSQTLRLDE
AMEAIGDDDPFTAKLSFEQGGSEFVPVVVNRSVLRSMSRRDVLIKRWPPPLQWQYFRSLL
PDASITMCPSCFQMFHSEDYELLVLQHACCPYCRRRIDDTGP
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgtgttgacgtggagagacaaagtggagcaatgtatctacgacctcgcattt
aagcctgatggaactcaactgattctggctgcaggaaacagattgctggtttatgacacc
tcggatggcaccttacttcagcccctcaagggacacaaagatactgtgtactgtgtggcg
tatgcaaaagatggcaagcgctttgcatctggatctgctgacaagagcatcattatctgg
acctcaaaactggaaggcattctgaagtacacgcacaatgactctatacagtgtgtctcc
tacaatcctgttacccaccagctggcatcctgttcctccagtgactttgggctatggtct
cctgagcagaagtctgtctccaagcacaaatccagcagcaaaatcacctgctgcagctgg
acaaacgatggtcagtacctggctctggggatgtccaatggggtcatcagcatacggaac
aaaaatggcgaagagaaagtgaagattgagcggccagggggttccctgtccccaatatgg
tccatctgctggaatccttcaagccgatgggagaatatctggatgagcagagagaacgag
gatgctgaggatgtcattgtcaacagatattttcaggaaatcccttccattctgaagtca
acagtgtacagtagtcagggtagtgaggcagaggaggaagagcaagaggaagaggacgac
agtcccagggacggcaactcagaggaacataatgacatcctggctgtagctgactgggga
cagaaactttccttctaccagctgagtggaaaacagattggaaaggatcggccactgaac
tttgacccctgctgcatcagctacttcaccaaaggagagtacattttggtggggggttca
gacaagcaggtatctcttttcaccaaggatggagttcgactgggaaccgttggggagcag
aactcctgggtgtggacctgtagagtgaaacctgactctaattatgtggtggtaggctgc
caggatggcactatttccttctaccagcttatctttagcacagtccacggactctataag
gatcggtatgcctacagggatagcatgacagatgtcattgtacaacacctgatcacagag
cagaaagttcggattaaatgcagagagcttgtcaagaaaattgccatctacaaaaatcga
ttagctattcaactgccggagaagatcctcatctatgagctgtactcagacgactcagca
gacatgcattaccgggtgaaggagaaaattgtcaagaagttcgagtgcaacctgctggtg
gtgtgtgccgaccacatcatcctgtgtcaggagaagcggctgcagtgcctgtccttcagc
ggagtgaaggaaagggagtggcagatggagtccctcatccggtacatcaaggtgatcggt
ggccccgctggaagggaaggtctgttggtgggcctgaaaaacggccagatcctgaagatc
tttgtggacaatctctttgccattgtcctgctgaagcaggccacagccgtgcgctgcttg
gatatgagtgcctcccggaataagctggcggtggtggatgaaaatgacacatgcttggtg
tatgacatccacacgaaggagctgctttttcaggaaccaaatgccaatagtgtggcctgg
aacacccagtgtgaggacatgctttgcttctccggaggaggctatctcaacatcaaggcc
agcaccttcccggtgcaccagcagaagctgcagggcttcgtggttggctacaatggctcc
aagatcttctgccttcacgtcttctctatgtctgccgtggaggtgccacagtctgctccg
atgtaccagtaccttgataggaaaatgttcagagaagcctaccagatcgcctgcttggga
gtgacagacactgactggcgtgaactggccatggaagctttagaaggattagagtttgaa
actgcaaagaaggccttcaccagagtccaggaccttcgatacctagagctgatcagcagt
attgaggagaggaagaagcggggagagaccaacaatgacctgtttctggcagatgtgttt
tcctaccaggggaagttccacgaagctgccaaactgtacaagaggagcgggcatgacagc
ctcgcccttgacatgtatactgacctctgcatgttcgagtacgccaaggatttccttgga
tctggagaccctaaagaaacaaagatgctcatcaccaagcaggctgactgggctagaaac
atcaatgagcccaaagctgcggtagagatgtacatctcagcaggggagcacatcaaggcc
atagagatcagtggcagccatggctgggtcgacatgttgattgacattgctcgaaagctg
gacaaggctgagcgggagcccctgctcatgtgtgctcggtactttaagaagctggacagt
cctggctatgctgccgagacctacctaaaggtcggtgacctgaagtctctggtgcagctg
tatgtggacaccaagcgctgggatgaggcctttgctttgggtgagaagcaccctgagttc
aaagatgacatctacgtgccctatgcgcagtggctagcagagaacgaccgatttgaggaa
gcccagaaagcattccacaaggccgggaggcaaggggaggcagtccgagtgttggagcag
ctcacgcacaacgccgtggtggagagcaggtttaatgatgctgcctactattactggatg
ctgtccatgcagtgcctggacatggcgcaagcagatcctgcccagaaggatgtgatgctt
gacaaattccaccatttccagcacttggctgagctgtaccatggctaccaaaccattcat
cgctatacggaggagccgttcagctttgacctccccgaaaccctcttcaacatctccaag
tttttgctgcacagcctgaccaaggctacccccttgggcatctcgaaagtgaataccctc
ttcacactggccaagcagagcaaggctctgggcgcctacaagctggcccggcatgcctat
gacaagctccgggggctgcagatcccagcaaggatccagaagtccattgagctgggcacc
ctgaccatccgctccaagcctttccatgacagcgaggaattggtacccttgtgctaccgc
tgctccaccaacaacccgctgctgaacaacctgggcaacgtgtgtatcaactgccgccag
ccctttatcttctctgcctcttcctatgaggtgctgcacctggtggagttctacctagaa
gagggaatctctgacgaagaagctgtcgccctcatcgacctggaggcaccaagacacaag
agggagagcaaatggcaggagattgcaagcaacaattcacagacgctgaggctggatgag
gccatggaagccataggcgatgatgacccgttcacagccaagctgagctttgagcaaggt
ggctctgagtttgtgcctgtggtggtgaaccggtcggtgctgcgctccatgagccgaagg
gatgttctcatcaagcgctggcctccaccgctgcaatggcaatacttccgctcgctgctg
cccgatgcctccatcaccatgtgtccctcctgctttcagatgttccattcggaggactat
gagctgctggtactccagcacgcctgctgcccctactgccggagacgcatcgacgatact
ggcccgtga
DBGET
integrated database retrieval system