Phodopus roborovskii (desert hamster): 127236688
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Entry
127236688 CDS
T08852
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127236688 (Rnf123)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127236688 (Rnf123)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127236688 (Rnf123)
Multi subunit type E3
KPC complex
127236688 (Rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
127236688
NCBI-ProteinID:
XP_051060401
UniProt:
A0AAU9YSR6
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MASKGAGMSLSRKSYRLTSDTEKSRVTGIVQEKLLNDYLYRIFSSPDYGPPAATSRDPLN
FHNLPEHVEQLLQVDSEDEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSN
FGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTYNSYAYDGNRVRK
WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLS
FKESVAFNFGSRPLRYPVAGFRPLQDPPFTDLVRAQRLLGCFRAVLSVELDPVEGRLVEK
ESSEWQLQGQPTALLTLAHIFHHFAPLLRKVYLVEAVLVSFLLGITEKGTPEQAQSVVHQ
ILDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTISILRHEKSRKF
LLSNVLFDMLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHRSSREGRDSKEAKEETTEER
QRRRAYERGCQRLKKRIEVVEGLQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENAS
GRGNMPMLCPPEYMVCFLHRLVSALRFYWDEYKASNPRASFSEEAYVPPQIFYNGKVDYF
DLQRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDEEPAPTAVQRPIQALA
MGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRPLSTIEKVKVRSLNVEQRSREDI
EGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGTVMMYNLSVHQQLGKMVGVSDDVNEYA
MALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYW
LLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRL
AATLAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRTAMVRNLLAPYEQ
RPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQRHMADLLR
QGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVS
LLRVLEMTITLVPEIFLDWSRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGL
ESVDHYPILVAVTGILVRLLVHGPASETEQATSVLLADPGFQLRSICYLLGQPEPLVPGT
ALPAPDRKRFSLQSYTDYINAEELAQVEQMLAHLTAASAQAAAASLPTSEEDLCPICYAH
PISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIASVEDWDKAANTSATSSAA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaagggggctggcatgtctttgtcccgaaagagctataggctgacctcagat
actgagaagtccagggtcacaggcattgtgcaagagaaactactgaatgattacctgtac
cgcatcttttcctctcctgattatgggccccctgcagccaccagcagggaccccctgaac
ttccataacctgccagagcatgtggagcagctgctgcaggtggacagtgaagatgaggag
agccagggacaagttgaagggcgacttgggccatctactgtggtcctagaccacacagga
ggctttgaggggcttctccttgtggatgatgatctcctgggggtgattggacacagcaac
tttggcactatccgctctaccacatgtgtgtacaaagggaagtgggtctacgaggtactc
atctcctcccaggggctcatgcagatcggctggtgcactatcaactgccgctttaatcag
gaggaaggggttggagatacatacaactcctatgcctatgacgggaatcgggtgcgcaaa
tggaacgtgaccacaacaaattatggcaaggcgtgggcagcgggagacatcgtgagctgc
ctgattgatctggacgatggcactctatccttttgcctgaatggtgtgtcactgggcact
gcctttgagaacctttccagaggcctgggaatggcctacttcccagccatcagcctgtca
ttcaaagagtctgtggcattcaacttcggcagccgtcctttgcgctacccagttgcgggc
ttccggcccctgcaggaccctcccttcactgacctggtgcgggcacagagattgctgggc
tgttttcgggcagtgttgagtgtggagctggaccctgtggaagggcgattggtggagaag
gaaagctccgagtggcagttgcaagggcagcccaccgccctccttaccctggcccacatc
ttccatcactttgcaccactcctgcgcaaggtatacctggtggaggctgtgcttgtgagc
ttcctgctgggcatcacggagaagggcacgcctgagcaggcgcagtctgtggtacaccag
atcttggacctcctgtggctcttcatggaggactatgaggtacaggattgcctcaagcag
ttgatgatgtctctgctacgtctctaccggttctcacccattgtcccagacctgggtcta
cagatccactacctgcgcctcactatttctatcctgagacatgagaagtcccgcaagttt
ctgcttagcaacgtccttttcgacatgcttcggtctgtggtcttcttttatattaagagc
cccctgcgtgtggaggaggctggcctgcaggaactcatccccaccacctggtggccccat
cgctccagcagggagggcagagacagtaaggaggcaaaggaggagaccactgaggagcgg
caacggaggcgagcctacgaacgtggctgccaaagactaaagaagcgcattgaagtggtg
gaaggactacaggtccagatcctgaagctgctgttggacaataaggatgacaatgggggt
gaagcttctaggtacatctttctgacaaaattccgaaagtttctgcaggagaatgccagc
ggccgggggaacatgccaatgctctgcccccctgagtacatggtttgcttcctgcaccgg
ctggtgtctgccctgcgcttctattgggatgaatacaaagcttccaacccccgcgcttcc
ttcagcgaggaggcgtatgtcccgccccagatcttctataatggcaaggtggattacttt
gaccttcagcgccttgggggcctcctctcacaccttcgaaagacccttaaagatgacctt
gcttccaaagccaatatcgtgattgaccccctggagctccaggcagctaccatggatgac
ctggatgaggatgaagagccagcccccacggcggtccagcgtcccatacaagccttggcc
atgggtggggctctgcccctgccccggccaggctggctcagttctccaaccctgggccga
gccaaccgcttcctcagcacagcagctgtgagcctcatgaccccacggcggcctctgagc
accatagagaaagtgaaggttcgctcgctgaacgtggagcagaggtctcgtgaggacatc
gagggcagccactggaatgagggcctgctgttggggagaccccctgaggagcccgagcag
cccctcaccgagaactcgctgctggaagtcctggatggcacagtcatgatgtataacctc
agcgtacaccagcagctgggcaagatggtgggtgtgtctgatgatgtcaacgagtatgca
atggccctgagagacacagaggacaaactccgccggtgccccaagaggaggaaggacatc
cttgcagagctgaccaagagccagaaagttttctcagaaaagctggatcacctgagtcgc
cggctcgcctgggtccatgccactgtctactcccaggagaaaatgctagatatctactgg
ctgttgcgtgtctgcctgcggaccatcgagcacggggatcgcacagggtctctctttgcc
ttcatgcctgagttctacctaagtgtggccatcaacagctacagtgctctcaagaattat
tttggccctgtgcacagcatggaagagctcccaggttacgaagagaccctgactcgcttg
gctgccaccctggccaaacactttgctgacccacgcatcgtaggcactgacattcgagac
tcactgatgcaggccctggccagctatgtgtgctacccacactctctgcgggctgtggaa
cggatccccgaggagcagcgtaccgccatggtcaggaaccttttggcaccctatgagcaa
cggccctgggcccagaccaactggatcctggtgcggctttggaggggctgtgggtttggg
taccgatatacacggctgccacatttgttgaaaaccaaaccagaggatgccaatttgccc
agcctccaaaaaccctgcccttccaccctactgcagcggcacatggcagatctgctgcga
caaggacctgatgtagcacctagcttcctcaacagtgtccttaaccagcttaactgggcc
ttctcggagttcatcggcatgatccaggagattcaacaggctgctgaacgcctagagcga
aactttgtggacagccggcagctcaaggtctgtgccacctgctttgacctctcggtcagc
ttgttgcgtgtcttggaaatgaccatcacactggtgcctgagatattccttgactggtcc
cgccctacctctgagatgctgcttcggcgccttgcacagctcctgaaccaggtgctgaac
cgggtgacagcagagaggaacctgtttgaccgtgtagtcaccctacggcttcctggcctg
gagagtgtggaccactaccctatcctggtggcagtgaccggcatcctggtacgcctcctg
gtgcatggtccagcctcagagacagagcaagccacctctgtgctgctggctgacccgggc
ttccagctccgctccatatgctacctcctggggcagccagagcccctagtacccggcact
gccttgcctgcccctgaccggaagcgcttctctctacagagctatacagactacatcaat
gctgaggagcttgcccaggtggagcagatgctggcacacctgactgctgcatctgcccag
gcagcagctgcctccctgcccaccagtgaagaggacctctgcccaatctgctatgcccac
cccatctctgctgtgttccagccttgtggccacaaatcctgcaaagcctgcatcaaccag
cacctaatgaacaacaaggactgcttcttctgcaaagccaccattgcatccgtagaagac
tgggacaaggcagccaacaccagtgccacctcctcagctgcctag
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integrated database retrieval system
