Phodopus roborovskii (desert hamster): 127237866
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Entry
127237866 CDS
T08852
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob01524
Platinum drug resistance
prob04115
p53 signaling pathway
prob04210
Apoptosis
prob04215
Apoptosis - multiple species
prob05010
Alzheimer disease
prob05012
Parkinson disease
prob05014
Amyotrophic lateral sclerosis
prob05016
Huntington disease
prob05020
Prion disease
prob05022
Pathways of neurodegeneration - multiple diseases
prob05134
Legionellosis
prob05152
Tuberculosis
prob05160
Hepatitis C
prob05161
Hepatitis B
prob05162
Measles
prob05164
Influenza A
prob05168
Herpes simplex virus 1 infection
prob05169
Epstein-Barr virus infection
prob05200
Pathways in cancer
prob05222
Small cell lung cancer
prob05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127237866 (Apaf1)
04215 Apoptosis - multiple species
127237866 (Apaf1)
04115 p53 signaling pathway
127237866 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127237866 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
127237866 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
127237866 (Apaf1)
05160 Hepatitis C
127237866 (Apaf1)
05164 Influenza A
127237866 (Apaf1)
05162 Measles
127237866 (Apaf1)
05168 Herpes simplex virus 1 infection
127237866 (Apaf1)
05169 Epstein-Barr virus infection
127237866 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
127237866 (Apaf1)
05152 Tuberculosis
127237866 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
127237866 (Apaf1)
05012 Parkinson disease
127237866 (Apaf1)
05014 Amyotrophic lateral sclerosis
127237866 (Apaf1)
05016 Huntington disease
127237866 (Apaf1)
05020 Prion disease
127237866 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
127237866 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127237866 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
127237866 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
NB-ARC
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
APAF-1-like_WHD
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
CARD
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Ge1_WD40
WD40_like
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
eIF2A
Beta-prop_HPS5
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
CARD_2
KNTC1_N
AAA_22
AAA_16
NPHP3_N
AAA_18
NACHT
ATPase_2
Motif
Other DBs
NCBI-GeneID:
127237866
NCBI-ProteinID:
XP_051062226
UniProt:
A0AAV0A8P1
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISDNVLTVAEEEKVRSQTTQYQRAAVLIKMI
LNKDNCTYISFYNALLHEGYKDLAALLHSGLPVLSSSSGKDTDGGITSFVRTVLCEGGVP
QRPVIFVTRKKLVNAIQQKLWKLNGEAGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFPG
GVHWVSVGKQDKSGLLMKLQNLCTRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLL
ILDDVWDPWVLKAFDNQCHILLTTRDKSVTDSVMGPKYVVSVESGLGKEKGLEILSLFVN
MKKEDLPVEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVN
KSLLFCDRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYYQPNTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLKAKQEVDSGRLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLEVKAHEDAV
LCCAFSSDDSYIATCSVDKKVKIWDSAAGKLIHTYDEHSEQVNCCHFTNKSNPLLLATGS
DDFFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDELLASCSADGTLKLWDVRSANEKKS
ISVKRFFLGSEDPPEDVDVIAKCCSWSADGAEIMVAAKNKILLFDTHTSDLLTEIHTGHH
STIQYCDFSPCDHLAVVALSQYCVELWNIDSHLKVADCRGHLSWVHGVVFSPDGSSFLTA
SDDQTIRVWETKKVCKNSAVVLKQEIDVVFQENEAKVLAVDNIRGLQLIAGKTGQIDYLP
GAQVSCCCLSPHLEYVAFGDEDGAIKIIKLPNNRVSSSRIGHKAVVRHIQFTADGKTLIS
SSEDSLIQVWNWQSEDYIFLRGHQETVKDFRLLEHSRLLSWSFDGTVKVWNIITGRIERD
FTCHQGAVLSCDISSDATKFSSTSADKTAKIWSFELASPLHELKGHTGCVRCSAFSLDGT
LLATGDDNGEIRIWNVSSGQLLHLCAPIAVEEGTATHGGWVTDLCFSPDSKMLVSAGGYL
KWWDVVTGDPSQTFYTNGTNLRKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaggcccggaattgtttgcttcaacatagagaagctctggaaaaggacatc
aaaacatcctacatcatggatcacatgatcagtgacaacgtcttaacagtagccgaggag
gaaaaagtgagaagtcagaccactcaatatcaacgagcagctgttttaattaagatgata
cttaataaagataactgtacctacatttcattctacaatgctctgctacatgagggatat
aaagaccttgccgcccttcttcatagtggccttcctgtcctttcttcttccagtggcaaa
gatacagacggcggaataacgtcatttgttaggactgtgctgtgtgaaggtggagtacca
cagaggccagttattttcgtcactagaaagaagctggtgaatgcaattcagcagaagctc
tggaaactgaatggtgaagcagggtgggtcaccatatatggaatggcaggctgtgggaag
tctgtattagctgcggaagctgttcgagatcattccctcttagaaggttgtttcccagga
ggtgtacattgggtttcagttggaaaacaagacaagtctggccttctgatgaaactgcag
aatctttgcacacggctggatcaagaggagagtttttctcagaggcttccacttaatatc
gaggaggctaaagaccgtctccgtgttctgatgctccgcaaacacccaaggtctctgttg
atcttggatgatgtttgggatccttgggtgttaaaagcttttgacaaccagtgtcatatt
cttctcacaaccagagataagagtgttacagactcagtaatgggtcctaagtatgttgtc
tctgtggagagtggtctagggaaagagaaaggactggaaatcttatcactttttgttaac
atgaagaaagaggatttgccagtggaagcccacagtattataaaagaatgcaaaggttct
cctctcgtagtgtctttaattggtgcacttttacgtgattttcccaatcgctgggcatac
tacctcagacaacttcagaataagcagtttaagagaataaggaaatcttcctcttatgat
tacgaggctctggatgaagccatgtctataagtgttgaaatgctcagagaagatatcaaa
gattattacacagacctctccatcctgcagaaggatgtcaaggtccctactaaggtgtta
tgtgttctctgggacttggaaaccgaagaagttgaagacatactgcaggagtttgttaat
aagtctctcttattctgtgatcggaatggaaagtcattttgctattatttacatgacctt
caagtagattttcttacagaaaagaatcgaagtcagcttcaggatctacataggaaaatg
gtcactcagtttcagaggtattaccagccaaatactctatctccagatcaggaggactgc
atgtattggtataacttcctggcctatcacatggccagtgctaatatgcacaaagaactt
tgtgctttaatgttttccctggattggattaaagcaaaaacagaacttgttggccctgcc
catctcatacatgaatttgtggaatacaggcatatattggacgaaaaggactgtgcagtc
tgtgagaattttcaagagtttttgtctttaaatggacaccttcttggacggcagccattt
cccaatattgtacagctgggcctctgtgaaccagaaacttcggaagtgtatcaacaagca
aagctgaaggccaagcaggaggtggacagtgggaggctttacctcgagtggataaataag
aagactatcaagaatctctcccgcttagttgtccgcccccacacagatgctgtttaccat
gcatgcttttctcaggatggtcagagaatagcttcttgtggagccgataaaaccttacag
gtcttcaaagccgagacgggggagaagcttctggaggtcaaagctcacgaagatgcagtg
ctctgctgtgcattctcttcagatgacagttacatagccacctgctcagtggataaaaaa
gttaagatttgggattctgcggctgggaagctaatacacacctatgacgagcactcagag
caagtcaattgctgccatttcaccaacaaaagtaatcccctcctcctggccactggctca
gatgacttcttcctcaaactctgggatttgaatcaaaaagaatgtcgaaatactatgttt
gggcatacaaattcagtcagccactgtaggttctcaccggatgacgagttactggctagc
tgttcagctgatggaacattaaagctttgggatgtgaggtcagcgaacgagaagaaaagc
atcagtgtgaaacggttcttcctgggttcagaggaccccccagaggatgtggacgtcata
gcgaaatgctgctcctggtctgcagacggtgctgaaataatggtggcagcaaaaaacaaa
atccttctttttgatactcatactagtgacctattgacagagatccatacaggccatcac
agcaccatccagtactgtgacttctccccctgtgaccatttggcagtggtcgccctgtcc
cagtactgtgtagagttgtggaatatagattcacacttaaaggtagctgattgcagagga
catttaagctgggttcatggtgtggtgttttctcccgatggttcatcatttttgacagcg
tctgatgaccaaacaatacgggtctgggagaccaagaaggtttgcaagaactctgcggta
gtcttaaagcaggaaatagacgttgtgtttcaagaaaacgaagcgaaggtccttgcagtt
gacaacatcagaggcctacaactcattgctgggaaaacaggccagattgattacctgcct
ggagctcaagtgagttgctgctgcttaagtccacatcttgagtatgtggcgtttggagat
gaagatggagccattaagattataaaactcccaaacaacagagtttccagctctaggatt
ggacacaaggcagttgtgcggcacatacagttcacagctgacgggaagacactcatttca
agttctgaagattccctaattcaggtgtggaattggcagtcagaagactacatctttctg
cggggccatcaggaaacagtgaaggacttcaggctcctagaacattcaagattgctttcc
tggtcgtttgatggaacagtgaaggtatggaatatcattactgggaggatagaaagagac
ttcacttgccatcagggtgcagtactttcttgtgatatttcctctgatgctaccaagttt
tcatctacctctgccgataagactgcaaagatctggagtttcgaactggcttcccctctt
cacgagttgaagggtcacaccggctgcgtccgctgctctgccttctctctggatggtacc
cttttggcaactggagatgacaacggagaaatcaggatatggaatgtctcaagtggccag
ctccttcatttgtgtgccccgattgcagtagaagaagggacagctacccacggaggctgg
gtgactgatctttgcttctctcccgacagcaaaatgcttgtctctgctggaggatatctt
aagtggtgggatgttgtcaccggggacccctcacagaccttctacacaaatggaacgaac
ctcaggaaaatacatgtgtcccctgacttccggacatatgtgactgttgataatcttggt
attttatatattttacaggttttagagtaa
DBGET
integrated database retrieval system
