Prodigiosinella aquatilis: PCO85_10840
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Entry
PCO85_10840 CDS
T09220
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCO85_10840 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prod03400
]
PCO85_10840 (nth)
Enzymes [BR:
prod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PCO85_10840 (nth)
DNA repair and recombination proteins [BR:
prod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PCO85_10840 (nth)
Prokaryotic type
PCO85_10840 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WJV55835
LinkDB
All DBs
Position
complement(2311699..2312334)
Genome browser
AA seq
211 aa
AA seq
DB search
MNKEKRITILARLRENDPHPTTELHYASPFELLISVLLSAQATDVSVNKATEKLYKIANT
PQAMLDLGVDGVKTHIKTIGLFNSKAENVIKTCRMLIEHHQGQVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGKNVEQVEEKLLKVVPAEFRVDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCEFKEKTYA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggaaaagcggattaccattttagctcggctgcgggaaaacgatcctcacccc
acaacagagcttcattacgcctctccgtttgaattgctgatctctgtgttactctccgca
caggcgaccgatgtcagtgtgaacaaagccacggaaaaactttataaaattgccaataca
ccacaagcaatgctggatttaggcgtggatggagtcaaaacccacatcaaaaccatcgga
ttatttaacagcaaggcggaaaatgtgataaagacctgccgtatgctgatagagcatcat
caggggcaggttccggaagaccgcgccgcacttgaagctctgcccggcgtaggtagaaag
acagccaatgttgtactgaataccgctttcggttggccaaccattgccgtcgatacgcac
atttttcgtgtatgcaaccgaacggggtttgcaccgggcaaaaatgtcgaacaggtagaa
gaaaaactgttaaaagtggtacccgccgagttcagggttgactgtcatcactggctgatt
ctacatggtcgctatacctgtattgcccgcaaaccacgctgcggttcttgtctgattgaa
gatctgtgtgaatttaaagagaaaacatacgcgtaa
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