Pedobacter roseus: H9L23_00635
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Entry
H9L23_00635 CDS
T06980
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
proe
Pedobacter roseus
Pathway
proe01501
beta-Lactam resistance
proe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L23_00635
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L23_00635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
proe03036
]
H9L23_00635
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
proe02000
]
H9L23_00635
01504 Antimicrobial resistance genes [BR:
proe01504
]
H9L23_00635
Chromosome and associated proteins [BR:
proe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H9L23_00635
Transporters [BR:
proe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H9L23_00635
Antimicrobial resistance genes [BR:
proe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9L23_00635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
QNN42660
UniProt:
A0A7G9QH35
LinkDB
All DBs
Position
143070..144149
Genome browser
AA seq
359 aa
AA seq
DB search
MKTRFIPIIIIISTLAACGGNQKPVNISPEKNGKEAKYETTKVEEEALSSFTRIPGVLKP
FNQVNIFPKANGFVKAILVDLGSKVTKGQLLMTLEAPELESQLQSANSRYLQARETASAS
SEKYRRLKEAAKEEGSVSPLELDNALSRMKGDKAIAEAERSNVSSVRTMQDYLKVYAPFD
GVIVDRNVSPGALVSAGKSSDLPMLVLQDLTHMRLEVSIPEDYVDKVDLSQMVKFRFNAL
PGEQRQAKISRSANSLGNMRQEIVEVDVANKDNRLKAGMYAEVEIPLKSGATSLLVPNSA
IVRSTERKYVVEIANGKAKLVDIKEGMKGTEMTEIFGSIKAGTEIISPANDEIKSGQTL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccagattcattcccatcataataattataagtactctggccgcgtgtggcgga
aaccagaagcccgtgaacatcagtcccgaaaaaaacggcaaggaagccaaatatgaaacc
acaaaggtcgaagaagaggccctttccagttttacccgcattcccggggtgctcaagcct
ttcaaccaggtaaacatttttcccaaggccaatggttttgtgaaagcaatactggtcgat
ttgggttctaaggtgaccaaaggccagctgctgatgaccctggaagcaccggaactcgaa
tcacaattgcaatcggcaaattcccgttacctgcaggcacgggagaccgcatcggcgagc
agtgagaaatacagacgtctgaaagaagcagcaaaagaggaaggttcggtatctccgcta
gaacttgataatgcgctttccaggatgaaaggagataaggccatagcggaggctgagcgg
tcaaatgtatcctccgtacgtaccatgcaggactacttgaaagtatatgcgccttttgac
ggggtgatcgttgacaggaatgtatcaccgggagcactggtgtcggcgggcaaatcttcg
gacctacccatgctggtattgcaggacctgacccacatgaggcttgaagtttctatacct
gaggattatgtagacaaagtggacctaagccagatggtcaagttccgcttcaatgcgctg
ccgggggaacagcgccaggccaagatcagccggtctgcaaattcactgggcaacatgcgc
caggaaatcgtcgaggttgacgtggccaataaagataacaggttgaaggccggcatgtat
gccgaggttgaaatcccgcttaaatccggtgcgacttcgcttcttgtgcctaattctgct
atcgtgcgttctacagaacggaagtacgtagtggaaattgcaaatggtaaagccaagctc
gttgacattaaggaagggatgaagggaacagagatgaccgagatttttggttccatcaaa
gccgggacagagattatttcgcccgcgaacgatgagatcaaaagcggtcagacgctataa
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