Pedobacter roseus: H9L23_18910
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Entry
H9L23_18910 CDS
T06980
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
proe
Pedobacter roseus
Pathway
proe01501
beta-Lactam resistance
proe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
proe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L23_18910
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L23_18910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
proe02000
]
H9L23_18910
01504 Antimicrobial resistance genes [BR:
proe01504
]
H9L23_18910
Transporters [BR:
proe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H9L23_18910
Antimicrobial resistance genes [BR:
proe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9L23_18910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EMC4
Motif
Other DBs
NCBI-ProteinID:
QNN41169
UniProt:
A0A7G9QCU4
LinkDB
All DBs
Position
4610421..4613531
Genome browser
AA seq
1036 aa
AA seq
DB search
MSISTTSIKRPVLAIVMNLLIVLFGIIGYTFLGVREYPSIDPTVVSVRTSYPGANSDIIE
SQITEPLEKSINSIDGIRNISSSSNQGTSNITIEFNLDKNIEEAANDVRDKVSQAARTLP
KDIDGLPVVSKADANSDPILSMTIQSDKRNTLELSDYAENVIADRIQTIPGVSSVQIQGQ
RKYAMRIWMDPNKLSAYGLTSQDIVTALDNENVELPSGKITGATTELTVKTLGKLTDENQ
FNNLILKTDSNQVIKLKDVGYAVLGPENEETILRESGKPMVAIAIIPQPGANYLDISKEF
YKRFDKLKADIPQDIKLKVALDNTLFIKRSVTEVAETIGLSLVLVILIIYLFFRDWAIAF
RPLIDIPVSLVFTFFIMYAFGFSINVLSLLAIVLATGLVVDDGIVVTENIFKKVEEGMSP
FEAAIKGSNEIFFAVISISITLAAVFLPVIFLQGFVGRLFREFGVVIGAAVLVSAFVSLT
LTPMLNAYLMKKGGHKPSRFYNWTEPYFVKLNNAYESNLNKFLDKRWLSVPIILVCMGLI
FLFWKILPKETAPYDDRSAININVTTPEGASFTYTDQFIMKLNQLVIDSVPEKNVNITIT
SPGFGGSGSVNSGFVRMGLIDPEERERSQKDIADMLTRVTKKYTEGKTIVNQQPTISVGR
RGGLPISYIIQAQNFEKLREKIPLFMDAVSKDPTFTVSDVNLKFNKPEINLTIDRDKAKN
LGVSISAIAQTLNLGLSGQRFSYFFMNGKQYQVIGQFDRGDRKDPLDLSSVYVRNDKGEL
VQLDNVVTAKEESSPPQLYRNNRFIAATVSAGLAPGKSIGEGIDAMDAISKKVLDETFST
DLSGESRDFKESSSNTFFAFGLALLLVYLILSAQFESFKDPIIIILTVPMAVAGAFLSLW
LCGQSWNIFSQIGTIMLIGLVTKNGILIVEFANQLKEKGTPIPEAIREAAVSRLRPILMT
SLAIAIGALPIALALGAAAKSRMSMGTVIVGGTLFSLVLTLFVIPAIYSYWAKPYKPNKE
LKEAHRFEQEALHTEE
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctccaccacgagtataaaaaggcccgttctggccattgtgatgaacttattg
attgtccttttcgggataatcggctatacctttctgggtgtacgggaatacccgtcaatt
gatccaacggtagtttcggtaagaacatcttatccaggcgcaaactcggatatcatcgaa
tcgcagattaccgaacctctggaaaaatcgatcaattcgattgacgggatccggaatatt
tcttcatcgagtaaccagggtaccagtaacattaccattgaattcaaccttgataaaaat
atcgaagaagcggcaaacgatgtacgcgataaggtatcgcaggcagcacgtactttacct
aaagatatcgacggtttaccagtggtaagtaaggccgatgcaaactctgatccgatttta
tcgatgacgattcagagtgataaacgaaataccttagaattaagcgattatgcagaaaac
gtaattgccgaccgtattcagaccattccgggggtaagtagcgtacagatccaggggcaa
agaaaatatgctatgcgtatctggatggatccgaataaactgagtgcttacggcttaacc
tcgcaggatattgttaccgctttggataacgaaaatgtggagcttccatcaggaaaaatt
actggtgcaactactgaattaacggtaaaaacattgggaaaactgaccgatgaaaatcag
tttaacaacctgatcctgaaaacagacagcaaccaggtaattaagttaaaagatgtaggt
tatgcggttttaggtccggaaaacgaagaaaccattttgcgcgaatcgggcaaaccgatg
gtggccattgccattatcccacagcctggagccaattatcttgatatcagtaaagagttt
tacaaacgtttcgataaattaaaagctgatattccacaggacattaagcttaaagtagcc
ttagacaataccttgtttattaaacgttcggtaacagaggtggccgaaaccattggttta
tcactggtgctggtaatcctgatcatttacctgtttttcagggattgggccattgctttc
aggccattgatcgatattccggtttcattagttttcactttctttatcatgtatgccttt
ggtttctcgataaatgtactgagtttactggccattgtactcgctacaggtttagtggta
gatgatggtattgtggtgaccgaaaatatctttaaaaaggttgaagagggcatgtcgcca
tttgaggcggccattaaaggatcaaacgaaatctttttcgctgtaatttccatttccatt
acccttgcagcagtattcttacctgtaattttcttacagggtttcgtggggcgtttattc
agggaatttggagtggtaatcggcgctgctgtattggtatcggcttttgtatcgcttact
ttaaccccaatgctgaatgcttacctgatgaaaaaaggaggacataaaccatcaaggttt
tacaattggacagagccttattttgtgaagttaaacaatgcgtacgaatcgaacctgaac
aaatttttagataaaagatggctctcagttccgattattctggtatgtatgggcttaatt
ttcttattctggaagattttaccaaaggaaactgctccctatgatgatagaagcgcaatc
aacatcaacgtaactacgccagaaggtgcatcttttacttataccgatcagtttatcatg
aaactgaaccaattggtgatcgattcggttccggagaaaaatgtaaacattaccattact
tcaccaggttttggtggttcgggctcggtaaattctggttttgtaaggatgggtttaatt
gatccggaagaacgtgaacgttcgcaaaaagatattgccgatatgcttaccagggtgact
aaaaaatataccgagggtaaaaccatcgttaaccagcagcctaccatttcagttggccgc
cggggaggcttaccaatcagttatattatccaggcgcagaatttcgaaaagctaagggag
aaaattcctttgtttatggatgcggtatccaaagatcctacttttaccgtttcggatgtg
aacctgaaatttaacaaacccgaaatcaacctgacgattgatcgagataaagccaagaat
ctaggggtttcgatctctgccatcgcccaaaccctaaatctggggttaagcggacaaagg
ttttcctatttcttcatgaacggaaaacaatatcaggtaattggtcagtttgaccgtggc
gacagaaaagacccattggatttaagttcggtttatgtgcgtaatgataaaggcgaactg
gtacagctcgataatgtagttaccgctaaagaagagagcagtccaccgcagttataccgg
aacaaccgtttcattgcagctactgtttcggcaggcttagcccctggaaaaagtattggc
gaaggtattgatgccatggatgccatatctaaaaaagtactggacgaaaccttttctacc
gatttaagtggagaatcgcgggattttaaagaaagttcatcaaatactttctttgccttc
ggtttagccctactacttgtttatttaatcctttccgcacagtttgaaagttttaaagac
ccgattatcatcattttaaccgtaccaatggctgtagcaggtgcatttttatcgctatgg
ctctgcgggcagagctggaacattttcagtcagatcggaaccattatgttaattggtctg
gtaaccaaaaacggtattttgattgtcgaatttgccaaccagctaaaagaaaaaggcacg
ccgatacctgaagccatccgtgaagctgctgtttcacgtttgcgcccgattttaatgacc
agtttggccattgccattggtgcattacctattgctttggctttaggtgccgccgcaaaa
agcaggatgagtatgggaaccgtaattgtaggcggaacattgttctcgctggtattaacc
ttatttgtgatcccggccatttactcttattgggcaaaaccatacaaaccaaacaaagaa
ttaaaagaagcccatcgttttgaacaagaagctttacacacagaagaataa
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