Prosthecochloris sp. SCSIO W1103: OO005_07485
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Entry
OO005_07485 CDS
T09697
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
proi
Prosthecochloris sp. SCSIO W1103
Pathway
proi01501
beta-Lactam resistance
proi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
proi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OO005_07485
01503 Cationic antimicrobial peptide (CAMP) resistance
OO005_07485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
proi03036
]
OO005_07485
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
proi02000
]
OO005_07485
01504 Antimicrobial resistance genes [BR:
proi01504
]
OO005_07485
Chromosome and associated proteins [BR:
proi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OO005_07485
Transporters [BR:
proi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OO005_07485
Antimicrobial resistance genes [BR:
proi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OO005_07485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
BSH_CusB
BSH_CzcB
Biotin_lipoyl
HH_EMRA
BSH_YknX
HH_CzcB
Beta-barrel_RND_2
DUF7496
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
UZJ36607
LinkDB
All DBs
Position
complement(1610893..1612071)
Genome browser
AA seq
392 aa
AA seq
DB search
MVRRIRKRAGKFAFSVIMFSVALAGCGGGSRDGGMQQQAPQLPVMKIESSSTVVAKQYSA
LLEGVVTVEVRPQVDGTLQEIAVDEGAFVKSGQLLFGIDDRVYREELKSAVAAQSVAKAA
LEVAGIEVERLRPLVKNKVVSQIQLKQAQANHRSAKASLEQAEAAVQRARINLDYTRIKA
PVDGYIGDIPFRVGSLVSENQPEQLTTLTDVHEMQAYFSMSEIDFVRFKQQFPGSSIEEK
LTAVPPVTLLLADGSRYPSEGTLDAVSGQFDRSTASVMFRATFPNADGMLRSGNTGKVII
ANRYDNVVQVPQASTADLQDRIFVFKVSEDNSVTRTPITVVGKSNSNYIVSGGLEDGDMI
VVSGFSRLPDGTVIDPQPSEEEGSPDQKKQHR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggtgagacgtattcgaaaaagagcaggaaagtttgctttcagcgttatcatgttctct
gtggctcttgcagggtgtggcggaggaagcagggatggagggatgcagcagcaggcgccg
cagcttcccgtcatgaagatcgagagttcttcgacggttgttgcaaaacagtattcagcc
ttgctcgaaggggttgtcacggttgaagtcaggccccaggttgacgggactcttcaggaa
atagcagtcgatgaaggtgcgtttgtcaaatccggccagttgctcttcggtatcgatgac
cgggtgtaccgtgaagagctgaaatccgccgtagctgcgcaaagtgtggcaaaagcggct
cttgaagttgccgggatcgaagtggaaaggctcaggccgctggtgaaaaacaaggtcgtg
tcgcaaatacagttaaagcaggcccaggcgaaccaccggtctgcaaaagcaagtctcgag
caagcggaggccgcggttcaaagagctcgtatcaatctcgattataccaggataaaggct
cccgtggacggttacatcggtgatataccgtttcgtgtcggcagcttggtaagcgagaac
cagccggaacagttgaccacattaaccgatgtgcatgagatgcaggcttatttcagtatg
agcgagattgactttgtccgtttcaagcagcagtttccgggcagctcaatcgaggaaaaa
cttaccgccgtgccaccggttaccctgcttcttgccgatggcagccgttatccttccgaa
gggacgctcgacgcggtcagcggccagtttgatcgctctaccgcttcagtcatgtttcgg
gcgacctttccaaatgctgacggaatgcttcgttcgggcaacaccggaaaagtaatcatt
gccaaccgttacgataacgttgtgcaggtgccccaggcaagcacggcggatcttcaggac
aggatttttgttttcaaggtttcggaggacaacagtgtgacgagaaccccgataacagtt
gtcggcaaaagcaattccaattatatcgtcagcggtggtcttgaagacggcgatatgatt
gtcgtgtccggcttctcacgtttaccggacgggacagtgatcgatccacaaccttctgaa
gaagaaggcagccctgatcagaaaaagcagcatcgatga
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