Proteiniphilum propionicum: KDN43_03620
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Entry
KDN43_03620 CDS
T08430
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
proj
Proteiniphilum propionicum
Pathway
proj03030
DNA replication
proj03410
Base excision repair
proj03420
Nucleotide excision repair
proj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDN43_03620 (polA)
03410 Base excision repair
KDN43_03620 (polA)
03420 Nucleotide excision repair
KDN43_03620 (polA)
03440 Homologous recombination
KDN43_03620 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proj03032
]
KDN43_03620 (polA)
03400 DNA repair and recombination proteins [BR:
proj03400
]
KDN43_03620 (polA)
Enzymes [BR:
proj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDN43_03620 (polA)
DNA replication proteins [BR:
proj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KDN43_03620 (polA)
DNA repair and recombination proteins [BR:
proj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KDN43_03620 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDN43_03620 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Gp-FAR-1
HHH
RNase_H_2
Exo5
Motif
Other DBs
NCBI-ProteinID:
ULB35141
LinkDB
All DBs
Position
965416..968199
Genome browser
AA seq
927 aa
AA seq
DB search
MNKNRLFLLDAYALIYRSYYAFIKNPRIDSKGRNTSAVFGFVNTLEEVLREENPSHIAVA
FDPEGPTFRHKEFEGYKAQRDATPEDIKLSVPIIKKIIEAYNIPILEVPGYEADDVIGTI
AKRADKERFDVYMMTPDKDFAQLTETHIFIYKPKYGSSGYDVLNDKKVMEKYALSHPEQM
IDLLGLMGDSADNIPGCPGVGEKTAIKLLHQFGSIENLLENNDQLKGALKNKIEENRDQI
LFSKFLATIKTDVPIEVRENDFIRKEMDKDALQEIFEELEFRTLITRVFKQDFQKKKSNE
PVQGDLFSMFDNTSVPEETQLLSNFADIHTTPHQYIMVQSEEEMVALNKKLCARKSVCFD
TETTGVDPLLSDLVGLSFAYTEGEAYYVPISANRDRALQQTKIFKTFFEDEGIEKVGQNI
KYDILELRNYNINVKGALFDTMIAHYLLNPEIRHGMDYMAETYLKYRTIHIDELIGPKGK
NQKNMRDVDPVLVTDYAAEDADITLKLKNILKKEISQNNLTHLLYEVELPLIHVLADMEW
TGVRLDLEALKDLSKEYTAELLQIEREIMEMAGTEFNMNSPKQTGEVLFDRMKIVERPKK
TKTGQYKTSEEELEKIKSKHPIIAKILEQRSLKKLLSTYIDSFPQLINPRTGKIHTSYNQ
TVAATGRLSSTNPNLQNIPIRDERGKELRKVFIPDEGCIFASSDYSQIELRIMAHLSSDK
NMVEAFNKGEDIHAATSARIYKIPLEEVTEDMRRIAKTANFGIIYGITPYGLSERLNISR
SDAKELIDGYFDTFPGVKSYMDKSISKAREKGFVETIFGRRRYLPDINSRNATVRGYAER
NAINAPIQGSAADIIKVAMIRIFNRFQQEKLKSKMILQVHDELDFNVFPEELGRIKEIVV
EEMENACKLSVPLKTDLGVGDNWLSAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacagacttttccttctcgatgcatacgcacttatctacaggtcttattac
gcatttattaagaacccaaggatagactcaaagggacgtaatacatctgctgttttcgga
ttcgtgaatacgcttgaagaggtgcttcgcgaggaaaatccttcacatattgccgtagca
ttcgatcctgaagggcctaccttccgccataaagagttcgagggttataaagctcaacga
gatgcaactcctgaagatatcaaattatcagttcccatcattaaaaaaattattgaagca
tataatatccccattcttgaggttcccggatatgaggcagatgacgttattggcactatt
gccaaacgagccgacaaagagcgtttcgatgtatatatgatgacccccgacaaagatttt
gcccagctcacagagactcatatcttcatctacaaaccaaaatacggaagtagcggatat
gatgtactaaacgataaaaaagtaatggaaaagtacgccctatcccacccggagcagatg
attgatcttctggggctaatgggggacagcgccgacaatattcccggttgtcccggtgta
ggagagaaaactgctattaaactgctacaccaattcggttctatagagaatctcctcgaa
aacaacgatcaactgaaaggcgcattgaaaaacaaaattgaagaaaaccgcgatcaaata
ctattctcgaaatttcttgccacaataaaaacggatgtaccaattgaggttagagagaac
gactttatacgtaaggagatggacaaggatgctctgcaggagatctttgaagaactggaa
tttagaacactgattacgcgagtatttaaacaggattttcagaagaaaaaatcaaacgaa
cctgtacagggagatctcttttcgatgtttgacaacactagcgtgccggaagaaactcaa
ttactgtctaatttcgctgatattcataccactcctcatcaatatatcatggtacaatcg
gaagaggagatggtagcactcaacaagaaactgtgtgcacggaaatcggtctgtttcgat
actgaaacaacaggtgttgatccgcttctaagcgacctggtagggctatctttcgcatat
actgagggtgaagcgtattatgtacctatatcagctaatcgtgatagagcgctgcaacag
acaaaaattttcaagactttttttgaagatgagggtatagaaaaggtagggcagaacatc
aaatatgatattctcgaacttcgtaactacaatatcaatgtaaagggtgcactttttgat
acgatgatagctcattatcttctcaatccagaaatccgccacggaatggattacatggct
gaaacatacctcaagtacaggaccattcatattgatgaacttattggcccaaaaggaaag
aatcaaaaaaatatgagagatgtagatccggtccttgtaacggattatgctgctgaagat
gccgatatcacgctaaaacttaaaaatattctcaaaaaagagatcagtcaaaacaatctt
acacatcttttatacgaggttgaattgcctcttatacatgtacttgccgacatggagtgg
acaggcgtacggttagacctggaagctttgaaagacctctcaaaggagtatacggccgaa
cttctgcagatagagagagagattatggagatggctggcaccgagttcaatatgaactcc
ccgaaacagacgggggaagtgctttttgaccgtatgaagattgttgaaaggcctaaaaaa
accaaaactggccaatacaaaactagtgaggaagaacttgaaaagatcaaatccaaacac
ccaatcatcgctaaaatacttgaacagagaagccttaaaaaactgcttagcacctatatc
gattcttttccacagcttataaacccccgaactgggaaaatacatacatcatacaatcaa
actgttgcagcaacaggacgtttgagcagcacaaatccaaaccttcagaatataccgatc
cgcgatgaacggggtaaagagttgcgcaaagtgtttatacccgatgaaggatgtatattt
gcatcatcagactattcacagatagagctgcgcatcatggcacatctgagtagtgataaa
aatatggtggaagcgttcaataaaggagaggatattcatgctgccacatccgcaagaatc
tacaaaattcctttagaggaggtaacagaagacatgcgacgaattgccaagacagccaac
ttcggtattatctatggcattacaccttacggattgtcggagaggctcaatatttcacgt
agtgatgccaaagaactgatagatggatattttgataccttccccggtgtgaagagttac
atggataaaagtatctccaaagccagggaaaaaggatttgtggaaactatcttcggccgc
aggcgttacctgccggatattaactcccgcaacgccactgttcgcggatacgccgaaagg
aacgccattaatgctcctattcagggtagtgccgcagatataatcaaggtagctatgata
cgaatattcaatcgttttcagcaagagaagctgaagtccaaaatgatccttcaggtgcat
gatgagcttgatttcaatgtttttcctgaagaactgggaagaataaaagagatagtggtg
gaagagatggagaatgcctgcaaactaagtgttccgctgaaaacagacctgggagtaggt
gataactggctgtcagcacattga
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