Proteiniphilum propionicum: KDN43_04310
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Entry
KDN43_04310 CDS
T08430
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
proj
Proteiniphilum propionicum
Pathway
proj03030
DNA replication
proj03430
Mismatch repair
proj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDN43_04310 (dnaE)
03430 Mismatch repair
KDN43_04310 (dnaE)
03440 Homologous recombination
KDN43_04310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proj03032
]
KDN43_04310 (dnaE)
03400 DNA repair and recombination proteins [BR:
proj03400
]
KDN43_04310 (dnaE)
Enzymes [BR:
proj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDN43_04310 (dnaE)
DNA replication proteins [BR:
proj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDN43_04310 (dnaE)
DNA repair and recombination proteins [BR:
proj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDN43_04310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
CDC24_OB3
SSB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ULB35267
LinkDB
All DBs
Position
complement(1114798..1118541)
Genome browser
AA seq
1247 aa
AA seq
DB search
MHHFVHLHVHSQYSLLDGQASIQRLIDKAAEDGMKAIALTDHGAMYGIKEFLNYASRKNA
PLNAEIKKLKKEIDALAKSGEAPDKRQQLNDKLSETKRKLFKPIVGCECYLARRNRFLQT
DKIDGSGWHLVVLAKNLQGYKNLIKIVSKSWTEGFYYRPRIDKELLEQYHEGLIVSSACL
GGEISRKIDDGRINEAEEAVKWYKSVFGDDYYLELQRHKTDRPDADRTTYLKQERVNSEM
IRIARKYDVKLIATNDVHFVNEEDADAHDRLICLSTGKDFDDPDRMRYTKQEWLKTTEEM
NRIFSDIPEALTNTLEIADKVEFYSIDHPPLMPFYPINPQFGTEELYKQKYSEKDLIEEF
GEKTFHRLGDYDKVIRIKLEAEYLTHLTKKGAEKRYGKDLSEEIVERLKFELDTIKNMGF
PGYFLIVQDFINAAREMGVAVGPGRGSAAGSAVAYCLQITDIDPLKYDLLFERFLNPDRI
SMPDIDIDFDDEGRGKVLRWVTEKYGNERVAHIITYGTMATKSSIRDVARVHKLPLSESN
RLAKLVPDRIPNVKKINLKTAIENVPELKEAANSSDPLVRDTLRYAEMLEGNVRNTGVHA
CGVIIGQTDISDVVPISTAEDKETKETLLVTQYEGSVIEETGLIKMDFLGLKTLSIIKDA
LTNIELNRGIKVDINSIDMDDAPTYRLYCNGQTTGTFQFESAGMQKYLKELQPSKFEDLI
AMNALYRPGPMDYIPTFIARKQGRQEITYDLPIMEKYLSETYGITVYQEQVMLLSRLLAG
FTRGQSDELRKAMGKKLIDKMTALKEKFLAGGKKNGYAEKTLNKIWNDWEKFASYAFNKS
HATCYSWVAYQTAWLKANYTSEYMAAVLSNNLNNITEITKFMDECKAMDINVLCPDVNES
FLKFSVNKEGDIRFGLAAIKSVGQGAVVDIIDERTKNGPFKDIFDFVERVNLSSCNKKTI
EALALSGAFDSLQGITREQFLAVNSKGEEFMDTLIRYGNKYQLDKMESINSLFGDDSSFQ
IAHPEIPQAASWSDMERLNKERELIGIYLSAHPLDDYEFILKHVCNADTLKLQDLDSLNG
KDITFGGMVTAVREGQTRRGSPYTIFKIEDYSGSYEIALFSEDSVNFGRYARNGLSVYIE
GRVQPKRFRQDELEVKISSISLLSEVKDKLISKITLQIPLSELDDTTVAELSALVKNNSG
NSLLYFQIIGKESHMNIELFSRPARIGVNKNFIDYLKNNLTIDFKIN
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgcaccattttgtacatttacacgttcactcccagtattcgttgcttgacgggcaggca
agcattcagcgccttatagacaaggctgcagaagacggcatgaaagctattgcgcttacc
gatcacggagcaatgtacggaatcaaagaattccttaattatgcttccagaaaaaatgct
ccattaaatgcagagatcaaaaagctgaaaaaagagatcgacgcactggcaaaaagcggt
gaagcaccggataaacgacaacagctgaacgacaagctgtctgaaacaaagagaaaacta
tttaagcctattgtcggatgtgagtgttatctggcacgacgtaaccgttttttacaaacc
gacaagattgacggtagcggatggcatctggttgtcctggcaaaaaatctgcagggttac
aaaaatctcataaagattgtttccaaaagctggactgaaggtttttactaccgtccgcgc
atcgataaagagttgcttgaacaatatcacgaaggccttattgtttcatccgcctgtctt
ggtggtgagatatcaagaaaaattgacgatggccggataaatgaagctgaagaagcggtg
aagtggtataaaagtgtttttggagacgattactacctggagttgcaacgccacaaaaca
gaccgtcccgatgctgaccggacaacttatctaaaacaggaaagggtaaacagtgaaatg
attcgcattgcgcgaaaatatgacgtgaagctgatagccactaacgacgttcactttgtg
aacgaagaggatgccgatgcacacgaccgcctaatttgcctgagtaccggaaaagatttt
gacgatcctgacaggatgcggtacaccaagcaggagtggctgaaaacgaccgaagagatg
aaccgcatattctcagatatccccgaagcgttaaccaacactctggagattgccgacaag
gttgagttctattctattgatcaccctccgctgatgcctttttaccctattaatccgcag
tttgggaccgaggagctgtacaaacagaaatattccgaaaaagacttgatcgaggagttt
ggagaaaagaccttccaccgattgggagactatgacaaagtaatccgaatcaagctggaa
gccgaatatctgacacacctgacaaaaaagggggcagagaagcgatatggaaaagatctc
agtgaagagatagtggaacgattgaaattcgagctggacactatcaagaatatgggattt
cccggatattttctcattgttcaggatttcatcaatgctgccagggagatgggtgtagcc
gtagggccgggacgagggtcagccgcggggtcggccgtagcctactgcctgcagattact
gatatcgatcctctgaaatacgaccttctgttcgaacgtttcctcaatcccgaccgtatc
tcaatgcccgatatagatatcgattttgatgatgaaggtcgggggaaagtacttcgctgg
gtgacagaaaaatatggtaatgagagggttgcgcacattattacatatgggacaatggcc
acaaaatcctcaatacgtgatgtggcgcgggtacacaaactaccgctttcggaatcgaac
aggctggcaaagctggtgccggacaggatcccgaacgtaaaaaagatcaatctgaaaaca
gcaatcgaaaatgtgcccgaactaaaggaggctgccaatagcagcgaccctctggtgaga
gatactctcaggtatgcggagatgcttgagggcaatgtcagaaacacaggcgttcatgcc
tgtggagtaataattggtcaaacagacatatctgatgttgtacccataagtactgccgaa
gataaagagacaaaagagactctcctggtgacgcaatacgaagggtcggtaattgaggag
acagggctgataaaaatggacttcctcggtttgaagaccctctctataattaaagatgca
cttaccaacatagagctgaatcgcggtatcaaagtcgatataaacagcatcgacatggac
gatgccccaacttacagactttattgcaatgggcaaaccaccgggacatttcagtttgag
tcggcagggatgcaaaagtatctgaaagagctacaaccaagcaaatttgaagacctcatt
gccatgaacgcgctctaccgacccggaccaatggattacatccctacttttatcgcacgg
aagcaaggcaggcaggagattacctacgacctgcccatcatggagaaatacctgagcgaa
acctacgggataacagtctaccaggagcaggtgatgcttctttcacgactgctggcagga
ttcacgagaggccagtctgatgagttgcgcaaagctatgggcaagaagcttatagataag
atgacagcactgaaggagaagtttcttgcaggaggcaagaaaaacgggtatgccgaaaaa
acccttaataaaatatggaacgactgggagaagtttgcctcatacgcctttaacaagtcg
cacgctacatgttactcctgggtggcctaccaaacagcgtggctaaaagccaactacact
tccgaatatatggctgcggtactctccaacaacctgaacaatattacggagatcaccaag
tttatggacgaatgtaaagctatggacataaatgtcctctgccccgacgtaaatgagtcg
ttccttaaattttccgtaaacaaagagggcgatatacgctttggccttgctgccataaag
agtgtggggcagggagctgttgtcgatatcattgatgagcggacaaagaacggccctttc
aaagatatattcgattttgtggagcgtgtcaacctctcctcttgcaacaaaaaaaccatt
gaagctttggctctttcaggagcttttgactcacttcaggggataaccagagagcagttt
ctcgctgtaaacagcaagggcgaggagtttatggacactcttatccgttacgggaataag
tatcagcttgataagatggaatcgataaattcactgttcggagatgactcatcattccag
atcgcacaccccgaaattccccaggcagcaagctggtctgacatggagaggcttaacaag
gagagagagcttatcggcatttatctatctgctcaccctcttgacgattatgagtttata
ctgaagcatgtatgcaatgccgatacgttgaaattgcaggatcttgactctctgaacggg
aaggatataaccttcggaggaatggtaaccgccgtgcgtgaaggacaaaccagaagaggt
tcaccttacactattttcaagattgaagattattcggggagttacgaaattgcactcttc
agtgaagacagcgtaaatttcggcaggtacgcgcgcaacgggctctcagtttatattgaa
gggagagtacagccaaaacgcttccgtcaggatgaacttgaggtaaaaatatcatctata
tctcttttgtctgaggttaaggacaaacttatttcaaagattacgttacaaatcccgctt
tcagagttagatgacactacggtggcggaattatcagctttagttaaaaacaattcggga
aattcgttgttatatttccagataatcgggaaagagtctcatatgaatatagagttgttt
tcacgcccagcaagaatcggggtaaacaagaatttcatcgattatctgaagaataatttg
actatcgactttaaaataaactaa
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