Proteiniphilum propionicum: KDN43_13655
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Entry
KDN43_13655 CDS
T08430
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
proj
Proteiniphilum propionicum
Pathway
proj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDN43_13655 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proj03021
]
KDN43_13655 (rho)
03019 Messenger RNA biogenesis [BR:
proj03019
]
KDN43_13655 (rho)
Transcription machinery [BR:
proj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KDN43_13655 (rho)
Messenger RNA biogenesis [BR:
proj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KDN43_13655 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
ULB34012
LinkDB
All DBs
Position
3308782..3310773
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AA seq
663 aa
AA seq
DB search
MAYNIIELNEKLTTELRVLAKEMGIRRPDAYKKEELIYKILDEQAIAETKKMSAESATRQ
ASYGKNRSNANAKKGGSDKKKVEPEKKAVKNEPQKKEQDTSKNQSKPAVAETEKPKKVVK
EDAMPEKSAAKTSSQSQTQTKSESASQKKSEAAKDTTTTTKGTTASTKEATTATKEATAA
PETPKSPGRPIQLVFRSSKHRNDEKKSAPAPVTLPPVVAEETSEVKDTAIEKETPVLGSK
VSMMDLISPSPLQPKQQPQAQQSKSHGQSQAQPQGQQQQQQKEKEKDPGYDFDGILTASG
VLEIMSDGYGFLRSSDYNYMSSPDDIYVSQSQIRLFGLKTGDVVEGPIRPPKEGEKFFPL
VKVDLINGRKPDDVRDRVPFDHLKPLFPNEKFNLTKGHNDNLSCRVVDMFSPIGKGQRGL
IVAQPKTGKTMLLKDIANAIADNHPDVYMIILLIDERPEEVTDMERSVNAEVISSTFDEP
ADRHVKIAEIVLNKARRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALH
KPKRFFGAARNIENGGSLTIIATALTDTGSKMDDVIFEEFKGTGNMELQLDRKLSNKRIF
PSVDIIASSTRRDDLLLSQETLNRMWVLRNFLSDMNSVEAMEFLLNRMRRTSSNEEFLIS
MND
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcttataacattattgagcttaatgaaaagcttacaaccgaattacgggtacttgcc
aaagaaatgggaataagacgcccggacgcatataagaaagaagaactcatctataaaatt
cttgacgaacaggcaattgcagagacaaaaaaaatgagcgccgaatcagcaaccagacag
gctagctatgggaaaaaccgatccaatgccaacgctaagaagggtggttctgataaaaaa
aaggtggagccggaaaagaaagctgttaaaaacgaaccgcaaaagaaagaacaggataca
tcaaaaaatcaatcgaaacctgccgttgctgaaacagaaaaaccaaaaaaagtagttaaa
gaagatgcaatgccggaaaagagtgctgcgaaaacttcttctcaatctcaaacccagaca
aaatcagagtcggcaagccaaaaaaaatcagaggcagcaaaagacacgactacaaccaca
aaagggacaactgcctctacaaaagaggcaactacagctacaaaagaggcaactgcagca
ccagaaactccaaaatctcccggaaggcctattcaattggtattccgctcatcaaagcac
cgaaacgatgaaaagaagagtgcgcctgctccagtaaccttaccaccggtagttgcagaa
gaaacatctgaagtaaaagatacagctattgagaaagaaactcccgttttgggcagtaaa
gtatcgatgatggatcttatttcaccttcaccgctacaacccaagcagcagccacaggct
caacaatcgaaaagtcatgggcagtcacaggctcaaccccaggggcaacagcaacagcaa
cagaaagagaaagagaaagatcccggttacgatttcgatggtatactcacggcatcgggc
gttctggagattatgtctgacggttacggatttctgcgctcttcggactacaactacatg
tcttcgccagacgatatctacgtttcacaatcgcagatccgtcttttcggacttaaaacg
ggtgatgtggtggaagggcctattcgtcctcccaaagaaggtgagaaattttttcctctg
gtaaaggtagatctaatcaacggtcgcaaacctgacgatgtgcgtgaccgtgttccattc
gatcacctgaaaccactattcccaaatgaaaaattcaaccttaccaaaggtcataacgat
aacctttcatgccgtgtggtagatatgttctcacccattggtaaaggacaacgcggactg
attgtagcgcagccgaagactggtaaaaccatgctgctaaaagatattgcaaatgcaatt
gcagataatcatcctgacgtatatatgattattctgcttatagatgagcgccctgaagag
gtgacagatatggagcgtagcgttaatgccgaggtgatatcttctacctttgatgagcct
gcagaccgtcatgtgaaaattgcagaaattgtattgaacaaagcccgcaggctggtggaa
tgtggtcacgatgtggtgatacttctagactcaatcactcgtctggcacgtgcttacaac
acagtacagcctgcatcggggaaggtactttctggtggtgtggatgccaacgcactgcat
aagcccaaacgtttcttcggtgctgcccgtaatatagaaaacgggggttctctaacaatt
atagcgactgccctcacagataccggctccaaaatggatgatgtgatctttgaagagttc
aagggaacaggcaacatggaacttcagctcgaccgtaagctatcaaacaaacgtattttc
ccgtcggtggatattattgcatcgagcacacgtcgcgatgatcttcttctttctcaggag
acgctcaaccgcatgtgggtgctccgaaatttcctttcggatatgaattcagtagaagcc
atggagtttctgcttaacaggatgagacgcacatcgagtaacgaagagtttcttatttca
atgaatgactaa
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