Proteiniphilum propionicum: KDN43_14780
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Entry
KDN43_14780 CDS
T08430
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
proj
Proteiniphilum propionicum
Pathway
proj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
proj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KDN43_14780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proj03021
]
KDN43_14780
03400 DNA repair and recombination proteins [BR:
proj03400
]
KDN43_14780
Enzymes [BR:
proj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KDN43_14780
Transcription machinery [BR:
proj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KDN43_14780
DNA repair and recombination proteins [BR:
proj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KDN43_14780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ULB34211
LinkDB
All DBs
Position
complement(3582610..3583611)
Genome browser
AA seq
333 aa
AA seq
DB search
MAILAFQKPDKVIMLQENTFSGKFEFRPLEPGYGITIGNALRRILLSSLEGFAITSVKIE
GVEHEFASIPGVIEDVTGIILNLKKIRFKRIVEEFETEKVSIAISGTDVFKAGDIGKLLT
GFEVLNPEQEICRMNKKAELRLELTINKGRGYVPADENRELISTDDVQTIAIDSIYTPIR
NVRYEIEDYRIEQKTDYEKLVIEITTDGSIHPKEALKEAAKILIQHFVLFSDDNKIMLET
SDSESIEEFDEEVLHMRQLLKRKLSDLNLSVRALNCLKAADVETLGQLVVHNKNDLLKFR
NFGKKSLTELEELLEGLNLTFGMDTSKYKLDKD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagcattccaaaaacccgataaagtaatcatgttacaggagaacactttc
tccggtaaattcgaattccgcccgctggaacccggatacggcattactataggcaatgcc
ttgcgccgtatactgctatcctcactggaaggattcgctattacatcggttaagatagag
ggtgtggagcatgagtttgcttctatcccgggtgttattgaagatgtaacaggtattatt
cttaatctgaagaagatacggttcaaaaggatagttgaagagtttgagacggaaaaagta
agcatcgctatttcgggaacggatgtgtttaaagccggagatattggtaaattactgacc
ggtttcgaagtcttaaacccagaacaggagatttgtcgaatgaataagaaggcagaatta
cgccttgagctcacaattaacaaggggcgcggttatgtacctgccgatgaaaatcgtgaa
ctaatttcaacagacgatgtgcagaccattgcaattgactccatttacactccgatccga
aatgtaagatatgagatagaagactatcgcattgagcaaaagacggactacgaaaaactg
gttattgagattactactgatggatccattcatccaaaggaggcgttgaaagaggcagct
aaaatacttattcagcactttgtacttttctctgacgataataaaatcatgcttgagaca
tccgattccgaaagtattgaggagtttgatgaagaggtgcttcatatgcgtcagcttctt
aaacgcaagctgtctgatcttaacctgtcggtaagggcactcaactgcttgaaagccgca
gatgtagagacgcttggacagctggttgtacacaataagaatgatcttcttaaatttcgt
aactttggaaagaaatctcttaccgaacttgaagagctccttgaagggctgaatctgacg
tttggtatggatacatcgaaatataaattagataaagactaa
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