Prosthecochloris sp. SCSIO W1101: OO006_08090
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Entry
OO006_08090 CDS
T09696
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
prow
Prosthecochloris sp. SCSIO W1101
Pathway
prow01501
beta-Lactam resistance
prow01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prow00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OO006_08090
01503 Cationic antimicrobial peptide (CAMP) resistance
OO006_08090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prow02000
]
OO006_08090
01504 Antimicrobial resistance genes [BR:
prow01504
]
OO006_08090
Transporters [BR:
prow02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OO006_08090
Antimicrobial resistance genes [BR:
prow01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OO006_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
LOH1CR12
Patched
Motif
Other DBs
NCBI-ProteinID:
UZJ40330
LinkDB
All DBs
Position
complement(1722582..1725752)
Genome browser
AA seq
1056 aa
AA seq
DB search
MFERFINRPVLATVISVFFVLLGLIGIAQLPLTQFPDIAPPSVRVSATYPGANAETIARS
VAPSLEEAINGVDDMTYMTSTSSNDGTLAINVFFRLGTDPDQAAVNVQNRVATATSQLPE
EVTKIGVTTAKMQNSMIMLISLVSDDSETYDATFLNNYAKINLIPEIQRVNGVGQATVFG
SRDYSMRIWLKPEQMAAYSISPQEVIAAVQSQNVEAAPGRFGQSNDEALELIIRYKGKLK
EPVEYEDIILRANADGSVLRLGDIARVELGSYSYDVDSYANGEECITMAIYQSAGSNSND
IQVALQEVLENASAAFPEGIDYIIPYSTKKSLDESIDQVIHTLFEAFALVFLVVFIFLQD
FRSTLIPAIAVPVAIIGTFFFMTLFGFSINLLTLFALVLAIGIVVDDAIVIVEAVHAKME
KTHLPARAATHKVMREITGAIVSITLVMASVFLPVGFLEGSTGMFYRQFAFTLAIAILIS
AVNALTLSPALCALFLTNSHSGEGGEKTGWLKNIELRFFKGFNAGFSVMTERYVGALRVL
IRRKWLSLGALAAVSSLVFWMASVTPSGFIPDEDSGFFILNASLPPGASLERTAETFEKV
EAILDEEESVKTAITVAGIDLIAGSTASPSAGLIFVSLEDPEERGPVKDIHAIMGSVSQK
LSVISEGTFFPIQPPTVPGFGNVGGLEIVLQDRTSGSLDDFSGVAKEYIGALMARPEIAF
AFTTFSTGYPQYELQVDEVRASQLGVDVDNLLMVMQAFYGSFQVSDFNRFGKYYRVVMQA
EPEDRADPSSLRGVFVKNSSGKMVPMTSLVSIKKVYGPQTVDHFNLFNALTVNAVVAPGH
TTGEAIGVAKEVAATVLPAGFSYDWKGMSREEVESGGQAVYIFVLSLVFVYLLLSAQYES
YLLPLAVILSIPTGILGVFAGIQLFGIENNIYVQVAMIMLIGLLAKNAILIVEFAIQRRR
AGQSLFDSALEGSRARLRPILMTSLAFAVGLSPLLWASGPSALGNHSIGAAAVGGMLSGA
LLGVLIIPVLYVLFQSLQEKISGPPHDPDAEEVSVE
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgatttattaacaggccggttctcgcaacggtaatatcggtattttttgtt
ctgcttggtttgatcgggattgctcagcttccgttgacgcaatttcccgacatcgctcct
cccagtgtgagggtatcggcaacgtatccgggtgctaatgccgaaactatagctcgttca
gtcgctccatcacttgaagaggcgatcaatggtgtcgacgatatgacctatatgacatcg
acatcgagcaatgacggtacccttgcaatcaatgtttttttcaggcttggtaccgatcct
gaccaggcggcggtcaatgtgcagaacagggttgcaaccgcaaccagtcaattgcccgag
gaggtgacgaagatcggggtgacgactgccaagatgcagaacagcatgattatgctgatt
tcgctcgtcagtgacgactccgaaacctatgatgcgacgtttttgaataactatgcaaaa
ataaacttgattccggagattcagcgagtaaacggtgtcgggcaggcaactgttttcggt
tccagagactattctatgcgtatctggttgaagcctgagcaaatggcggcttattccata
tctcctcaggaagtcattgccgctgtgcaaagccagaacgtcgaggcggcaccggggaga
ttcggtcaaagcaacgatgaagctcttgaactgatcattcgttacaagggtaagctgaaa
gagcctgttgaatatgaggatatcattctgcgggccaatgccgatggatcggtcttgcgg
ctcggtgatatcgcaagagtcgagcttggttcgtacagttatgacgttgattcctatgca
aatggagaggaatgtataaccatggcgatttaccagtcggcaggttcgaattccaatgat
atccaagttgcattgcaagaggttttggagaacgcttcggctgcttttcctgaaggcatc
gattacattattccctacagtacgaaaaaatcccttgacgagtcaatcgatcaggtcatt
cataccttgttcgaggcttttgcgctggtttttcttgttgtatttattttcctgcaagac
tttcgatcgacacttattcccgctattgcggttccggttgccattatcggtacctttttc
ttcatgactcttttcgggttttcgatcaacctgctgactcttttcgctctggttctggca
atcggtattgtggttgatgacgctatagttattgttgaggctgttcatgcgaaaatggaa
aaaacccatcttcctgcaagggcggcaacgcataaggttatgcgtgaaattaccggtgcg
attgtttcgatcaccctggtgatggcatctgtttttctcccggttggttttctcgagggt
tcgaccggtatgttctatcgtcagttcgcttttacgcttgccatagctattcttatttcc
gcagtcaatgcgctcactctcagtccggctttgtgtgcgctgtttcttaccaatagccat
agtggagagggtggcgaaaaaaccggctggctaaaaaacatagagttgcgttttttcaaa
ggcttcaacgccgggttttctgtgatgactgaacgttatgttggggctctgcgggttctg
attcgtcgcaagtggttgagtcttggggcgcttgctgcggtttccagtcttgttttctgg
atggcatcggtcactccctcgggctttattcctgacgaggatagtggtttctttattctg
aatgcatcacttccgccgggagcgtcgcttgaacgtacagcagagacttttgagaaggtc
gaagctatcttggatgaggaagaaagtgtgaagaccgcgatcacggttgccggtatcgat
ctcatagccggcagtactgcttctccttccgccggacttatttttgtctctcttgaagat
cccgaagagcggggtcctgtaaaggatattcacgctatcatgggcagcgtttcccaaaag
ctttcagtgattagtgaggggacgtttttccctattcagcctcctaccgttccgggattc
ggtaatgtggggggattggaaattgtattgcaggataggacatcgggcagcttggatgat
ttttccggtgtggcgaaagaatatatcggtgcgttgatggcccggccagaaattgctttt
gcatttacgacattcagcacaggctacccgcagtatgagttacaggtcgatgaagtcagg
gcaagccagcttggagtcgatgtcgataatctcctgatggttatgcaggctttttacggg
agtttccaggtatcggatttcaatcgtttcggtaaatattatcgggttgttatgcaggct
gaaccagaagaccgtgcagatccgtcttctctgaggggggtgtttgtgaaaaattcttca
ggcaagatggtgcccatgacctccctggtaagtatcaaaaaagtttacggtccgcagact
gtcgatcatttcaatcttttcaatgcattgactgtcaatgccgttgttgctcccgggcat
accaccggtgaagctatcggagtggcaaaggaagtcgctgcaacggttctgccggccggt
ttttcctatgactggaaaggtatgagccgtgaggaggttgagtcaggcggccaggcggtg
tatatttttgttctttcccttgtctttgtttatctgctgctttccgcgcagtacgaaagt
tatcttttgcctcttgcggttattttgtcgattccaaccggtatactcggggtgtttgcc
ggtatacagttgtttggcatcgaaaataatatttacgtgcaggttgccatgattatgttg
attggattgcttgctaaaaatgctatcctgattgtggagttcgctattcagcgaaggagg
gctggacagtctttgtttgattctgcacttgagggttcaagagcgaggctgcggccgatt
cttatgacttcgttggcttttgctgtcgggctttcgcctctgttgtgggcctcgggtcca
tcagctcttggcaatcattctattggtgcagcggcggttggaggtatgctcagcggggcg
ttacttggtgtgttgataattccggttctctatgtgctctttcagtctcttcaggaaaaa
atcagcgggccgcctcatgaccctgatgccgaggaggtctcggttgagtga
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