Pendulispora rubella: LVJ94_22800
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Entry
LVJ94_22800 CDS
T10973
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
prue Pendulispora rubella
Pathway
prue03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVJ94_22800 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prue03400
]
LVJ94_22800 (nth)
Enzymes [BR:
prue01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LVJ94_22800 (nth)
DNA repair and recombination proteins [BR:
prue03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LVJ94_22800 (nth)
Prokaryotic type
LVJ94_22800 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WXB10043
LinkDB
All DBs
Position
5990144..5990899
Genome browser
AA seq
251 aa
AA seq
DB search
MAAAKKKAASRSPAAKKTSRLPPGGAKKAAPSKPEKLDVFRRLAEYHADAHCELDHKNAF
ELLCATVLSAQSTDVAVNKLTPALFARYPDAQSMASAKPEDLEELISRIGMYRQKTKSLL
ALSQGIVENHGGEVPRTLAELTKLRGVGRKTANVVLGVAFGTPEGVVVDTHVQRISQRLG
WTKNQEPPEIEQDLCALLPRSEWDHASHVLIFHGRRVCGAIKPNCEGCPVNDVCPCAFRA
EQVGRKAARAR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcgaaaaagaaggcggcttctcgctctcccgcggcgaaaaagacgtcccgg
ctccctcctgggggagccaagaaggccgccccgtccaaaccggaaaagctcgacgtcttc
cgccgcctggccgagtaccacgccgacgcgcactgcgagctcgatcacaagaacgcgttc
gagctgctctgcgccacggtgctctccgcgcagagcacggacgtcgcggtaaacaagctg
acccctgccctcttcgcgcgctacccggatgcccaatcgatggcgtccgcgaagcccgag
gacctcgaggagctcatcagccgcattggcatgtaccggcaaaagacgaagagcctcctc
gcgctttcgcaaggcatcgtcgaaaaccacggcggtgaagtgccgcgcaccctggcggag
ctcaccaagctccgcggggtcggccgcaagaccgccaacgtcgtcctgggcgtcgccttc
ggcacccccgagggcgtcgtcgtcgacacccacgtgcaacgcatctcccagcgcctcggc
tggaccaagaaccaagagccgccggaaatcgagcaagacctctgcgccctgctgccccgc
agcgaatgggatcacgcgagccacgtgctcatcttccacggccgccgcgtctgcggcgcc
atcaagcccaattgcgaaggctgccccgtcaacgacgtctgcccttgcgccttccgcgcc
gagcaagtcggccgcaaagccgcccgcgcccgctga
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