Pyrgilauda ruficollis (rufous-necked snowfinch): 121349718
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Entry
121349718 CDS
T07608
Symbol
TIAM1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04530
Tight junction
pruf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121349718 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121349718 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121349718 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
121349718 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
RNA_pol_Rpc82
PDZ_6
PH_11
Motif
Other DBs
NCBI-GeneID:
121349718
NCBI-ProteinID:
XP_041316357
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MFVLLMMSDRDAMGNAESQSVEHAFYGDKQPGLGRKHTSRSLRLSGKASRRTRHASSGKI
IHRNSEVSTRSSSTPSIPQSLAENGLEPFAAEANLEDFGSAMWVERVDMGLRPVSYHTDS
SVTPSVDSSTVLTAASVHSMPDSEESRLYGDEPPFLAEGAGRALRYAGNGSAFADAAGFK
KKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKEAEAAQGPQAGGSPQPLAAC
QRANSMSDLYSPKTPGAAVNGGPRNAFGGYCRNLVSDIPELGSHKMASVAAEDAPSSYSN
YNTLPCRKSHCLSEGASNPQMSHSSSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTEL
LSRRSNATTASYSPPAGRAFVGSDSGSSSAGDGLRQGVYENFRRELEMSTANSEHLEEAG
SALSDEQSSGTLSSPGQSDILLSAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHY
WVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAF
LFQTCSQTELENWITAIHSACATAVARQHHKEDTLKLLKTEIKKLEQKIDMDEKMKKMGE
MQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASR
PTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKK
KQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFT
PSWFCLPNNQPALTVIRPGDTSRDVLEMICKTHQLDCSAHYLRLKFLLDNQIHFYVPKPE
EEIYELLYKEIEICQKITQHIQMEKSDASSDIYGFSLSSVEEEGVRRLYVNGVKETGLAF
KKGLKAGDEVLQINQRAAEELDSALLKDALLQPSLSLTVRTHPEPEEPQRLGQPPRRPEN
PPEPGDGALPFPGGSQGHSLCSDPDSSAEAAPEEAEAQDLESSDEAEKMSKSTEQVAAFC
RSLHEMNPSDCSAPPQDCAGPQLSTMRQLTDADKLRKVICELLETERTYVKDLNCLMERY
LKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLF
SLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYL
IKPIQRILKYPLLLKELFALTDVDSEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFD
QLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKD
GSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESE
GRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALK
GARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSEAVHGSSPEKEPAQGGDTDRWVEEQFD
LAQYEEQEDIKETDILSDDDDFCEAARGAQRELRERLQAASLAGGRRPERPCPPGDAHAA
RMAQLRKQAALPAINGEAHGEEVIWVRREDFVPGGKLNTEL
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgctgctgatgatgagcgaccgtgacgccatgggcaacgcggagagccagagc
gtggagcacgccttctacggggacaagcagccggggctgggccgcaagcacacgtcgcgc
tcgctgcgcctctcgggcaaggcctcgcgccgcacgcgccacgcctcctcgggcaagatc
atccaccgcaactcggaggtgagcacgcgctccagcagcacgcccagcatcccgcagtcg
ctggccgagaacggcctggagcccttcgccgccgaggccaacctggaggacttcggcagc
gccatgtgggtggagcgcgtggacatggggctgcggcccgtgtcctaccacacggactcg
tcggtgacgcccagcgtggacagcagcacggtgctgacggccgcctccgtgcacagcatg
cccgactcggaggagagccggctctacggggacgagccgcccttcctggccgagggcgcc
gggcgggcgctgcgctacgcgggcaacggctccgccttcgcggacgcggccggcttcaag
aagaagcgctccaagtcggccgacatctggcgcgaggacagcctggagttctcgctgtcc
gacctcagccaggagcacttgaccagcaacgaggagatcctgggcctggccgaggagaag
gaggccgaggccgcgcagggcccgcaggccggcggcagcccccagcccctggccgcctgc
cagcgcgccaactccatgagtgacctgtactcccccaaaacccccggcgccgccgtcaac
gggggcccccgcaacgccttcggagggtactgccggaacctggtgtccgacatcccggag
ctcgggagccacaagatggcttcggtggccgccgaggacgcgccctcctcctacagtaac
tacaacacgctgccctgcaggaagtcccactgcctctccgaaggggcctccaacccccag
atgagccatagcagcagcatgcaaggcaggagggcgaaaaccacccaggacgtcaacgcg
ggcgagggcagcgagttcacggacagcggcatcgagggcgctgccacggacacggagctg
ctgtcgcggcgctccaacgccaccacggccagctactcgccgcccgccggccgcgccttc
gtgggcagcgacagcggcagcagctcggcgggcgacgggctgcgccagggcgtctacgag
aacttccgccgcgagctggagatgagcacggccaacagcgagcacctggaggaggcgggc
tcggccctgagcgacgagcagagcagcggcacgctcagctcccccgggcagtccgacatc
ctgctgagcgccgcgcagggcaccgtgcgcaaggccggcgccctggccgtcaaaaacttc
ctggtgcacaagaagaacaagaaggtggagtcggccacgcgcaggaagtggaagcactac
tgggtgtcgctgaaaggctgcacgttgttcttctacgagacggacggcaggtctggcatc
gaccacaacagcatccccaagcacgccgtctgggtggagaacagcatcgtgcaggccgtg
cccgagcaccccaagaaggacttcgtcttctgcctcagcaactcccttggcgacgctttc
ctcttccagacgtgcagccagacggagctggagaactggatcacggcgatccactcggcc
tgcgccaccgccgtggcacggcagcaccacaaggaggacacgctcaagctgctcaagact
gagatcaaaaagctggagcagaagatcgacatggacgagaagatgaagaaaatgggggaa
atgcagctgtcctccgtgacagactccaagaagaagaagaccatactggatcagatcttc
gtgtgggagcagaacctggagcagttccagatggacctgttccggtaccgctgttacctg
gccagcctgcagggcggggagctgcccaaccccaagcgcctgctggccttcgccagccgc
cccaccaaggtggccatgggccgcctgggcatcttctccgtgtcctccttccacgccctg
gtggcggcgcgcaccggggagtcgggagtgaggaggaggacacaggccatgtccaggtct
gccagcaagaggaggagcaggttttcttctctctgggggctggacactacctcgaagaag
aagcaggggaggcccagcattaaccaggtgtttggagaaggagtggattcagtgaagaaa
tctctcgaagggatctttgatgacacagtcccggatggcaagagggagaaagaagtggcc
ctgagcagcgtccaccagcacaaccccgactgtgacatttgggtccacgagtacttcacg
ccctcgtggttctgcctgcccaacaaccagcctgccctgacagtcatccggcctggggac
acctccagggacgtgctggagatgatctgcaagacacaccagctggactgctccgctcac
tacctgcgcctgaagttcctgctggacaaccagatccacttctacgtgccaaagccagag
gaggagatctatgagctgctgtacaaggaaatagaaatctgtcagaaaattacccagcac
attcagatggagaagtctgatgcatcctctgatatttatggtttctctctgtcctcggtg
gaagaggagggggttcgccggctctacgtgaacggcgtcaaggagacgggcctggctttc
aagaaaggcctgaaggctggcgacgaggtgctgcagatcaaccagcgagctgcggaggag
ctggactcggcgctgctgaaggacgcgctgctgcagccctcgctgagcctcaccgtgcgc
acccaccccgagcccgaggagccccagaggctgggccagcccccgcggcgcccagagaac
cccccggagcccggggacggcgccctgcccttccctgggggcagccaagggcactccctc
tgcagtgaccccgacagctcagctgaggcagccccggaggaggcggaagcgcaggacctg
gagtcgtccgacgaggccgagaagatgagcaagagcacagagcaggtcgcagctttctgt
cgcagcctgcatgaaatgaacccctctgactgcagtgctcccccccaggactgtgcaggg
ccccagctgagcaccatgaggcagctcacggacgcagacaagctgaggaaggtcatctgt
gagctcctggagaccgagcgcacctacgtcaaggatttaaattgtctgatggagagatac
ctgaagcctctacagaaagaaaccttcctcacaccagatgagctggatgttctctttggg
aacctgactgaaatggtagcattccaggtagagttcctgaaaactctggaggatggagta
aggctggttccagacctggaaaagcttgaaaaagttgagcaatttaagaaagtgttgttc
tccctgggtggatccttcctgtactatgctgacaggttcaagctgtacagtgccttctgt
gccagccacacaaaagtccccaaagtcctggtgaaagccaagacagacactgctttcaag
gcgttcctggacgcccagaacccacgccggcagcactcctccaccctggagtcttacctc
atcaaacccatccagaggatactcaaataccccctcctgctcaaggagctctttgctctc
actgacgtggacagtgaagagcattatcaccttgatgtggccatcaaaaccatgaacaaa
gttgccagccacattaatgaaatgcagaaaatccatgaagaatatggggcagtgtttgac
caactcatagcggagcaaacaggggagaaaaaagaggtggccgacctttccatgggggac
ttgctcttgcataacacagtgatatggctgaaccctcctgcttccctgggcaagtggaag
aaggaacctgagctggcagccttcgtgttcaaaactgccgtggtcctcgtgtacaaggat
ggttccaaacagaagaagaaactgggaggatcccaccgagcctccatttatgaagactgg
gatccgttccggttccgccacatgatccctctggaagcgctgcaggtgcgggcgctggcc
agcgcagatgcggagaccaattctgtgtgtgagattgtccacgtcaaatctgagtctgag
ggcaggccagaaaggacatttcatctctgctgtagctctccagagcacaggaaggacttt
ctgaaggcagtgcactccatcctgcgggacaaacacagaagacagctccttaaaaccgaa
agtttgccctcctcccagcaatatgttccttttggtggaaaaagattgtgtgctctaaaa
ggtgcaaggccagccatgaacagggcagtgtcagccccgagcaagtctctggggaggagg
aggcggcggctggcccgaaacaggtttaccattgactcggaggccgtccacggcagcagc
cccgagaaagagcccgcgcagggaggggacactgaccgctgggtcgaggagcagttcgac
ctggcgcagtacgaggagcaggaggacatcaaggagaccgacatcctgagcgacgacgac
gacttctgcgaggcggcgcgcggggcgcagcgcgagctgcgggagcggctgcaggccgcg
tccctggcgggcggccggcggcccgagcggccctgcccgcccggcgacgcgcacgccgcc
aggatggcccagctgaggaagcaggcggccctgcccgccatcaacggcgaggcccacggc
gaggaggtcatctgggtgcggcgggaggactttgtgcccggcgggaagctcaacaccgag
ctctga
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integrated database retrieval system
