Pyrgilauda ruficollis (rufous-necked snowfinch): 121350503
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Entry
121350503 CDS
T07608
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121350503 (SCN4A)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121350503 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
121350503
NCBI-ProteinID:
XP_041317813
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQQVEMPEEEEVKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLQDLGLDNDTSAN
STFYDFMDDFTGNFTGNFTGNFTGNDTFDFEAYISDEANYYFLEGALDALLCGNSSDAGK
CPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFV
VVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
RSSSSNSLPSSVAGKGHDSDVNSDQDKAKDCNGQVVPKITLQRSDTVVDFNPHEPEKPDL
NHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCRPWVK
LKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEMV
LKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMND
FFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADSLAASDDDGELNNLQIAIGRITRGIALAKATLLALLRRLWKGKKVAPEEEQDPSKRDN
SVLNHVDTALEPKSGYLDGITGKEHIFMDELDHMNFINNPNLTVQVPIASEESDLYEETS
TQSDTEDTTKNPLCSDNASSVCSTVDYKPPAPEEEEVAEEAEEGNEPEECFTEGCVKRFP
CLYVDITSEKGKIWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRT
ILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSELG
AIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA
GKYYRCVNTTTGELFDIDVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATF
KGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKK
KFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGKVFDFVTKQVFDITIMILI
CLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFVV
VILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSMICLFQITTSAGWDGLLN
PILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILENFSV
ATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLIT
MDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLK
RKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDALGEDAPEKEGLIATKMQEIYGNT
GTDVDTAPALGLEPIPSSETPQDAPEEARAWGKEHVVKESLV
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctgcgccccttcaccccggcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccggataaagcggcagcag
gtggagatgcctgaggaagaggaggtcaagcccagcagtgacctggaagccggcaagaac
ttgcccctcatctatggtgacccacccctggagctgatcgggacccccctggaggacctg
gaccctttctacaaggacaagaagacgttcatagttctcaacaagggcaagtccatcttc
cgcttctcagccacccctgccctctacatgctggggcccttcaaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcaccattttaacc
aactgcgtgtttatgacgctgagcaaccccccggcgtggtctaagaatgtggaatacacc
ttcactgggatctacacctttgagtctctcatcaagatcctctcaagaggtttctgcatc
gacgacttcacattcctgcgtgacccgtggaactggctggacttcatggtcatctccatg
gcctacattaccgagttcgtggacctggggaacatctctgctctcaggactttccgtgtt
ctccgtgccttgaaaaccatcacggtgataccagggctgaagacgatcgtgggggctctg
atccagtcggtgaagaagctctcggacgtgatgatactcacggttttctgcctgagcgtc
tttgccctcatcggcctccagctcttcatgggcaacctccggcagaagtgtgtgcgctgg
cctccccccaacagcaccttcctgcaggatctggggctggacaacgacacctcggccaac
tccaccttctacgacttcatggatgacttcaccgggaacttcacggggaacttcaccggg
aacttcaccgggaacgacaccttcgacttcgaggcctacatcagcgatgaagccaattac
tacttcctggagggagccctggatgccctgctctgcgggaacagcagcgacgctgggaag
tgccccgagggctacgagtgcatgaaggccggcaggaacccgaactatggctacaccagc
tacgacaccttcagctgggccttcctggccctcttccgcctcatgacccaggacttctgg
gagaacctcttccagctgacactgcgggcagcagggaaaacctacatgatcttcttcgtg
gtggtcatcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatg
gcctatgctgagcagaacgacgccaccatgctggaggagcagcagaaggaggaggaattc
caacagctcatggagcagctgaagaagcagcaagaggagcaggaaaggctgttgcaggag
cgctcgtccagcagcaattccctgcccagcagcgtggccgggaaggggcacgactccgac
gtgaacagcgaccaggacaaggccaaggactgcaacgggcaggtggtgcccaagatcacc
ctgcagagatccgacaccgtggttgatttcaacccccatgagccggagaagccagacctc
aaccacctcactgtgggcaaccaggatgggccagggctggagaagagggtgggaagtgcc
atcagtgtcatctccaacgctgtggaagagctggaagaagctcaccagaaatgcccaccc
tggtggtacaaattcgcccacacattcctggtctggaactgctgccgcccgtgggtgaag
ctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctcggcatcaccatc
tgcatcgtgctcaacactctcttcatggccatggagcactaccccatgacggaggagttc
gagaacgtgctgagcgtggggaacctggtcttcacagggatcttcacggcagagatggtc
ctgaagctcattgctctggatccctacgagtatttccagcagggctggaacatctttgac
agcttcatcgtcactctgagtctggtggagctgggcctggccaacgtgcaggggctctcc
gtgctccgctccttccgcctgctgagggttttcaagctggccaagtcctggcccactctc
aacatgctcatcaagatcatcggcaactccgtgggtgccctgggcaacctcacgctggtt
ctggccatcatcgtcttcatcttcgccgtggtggggatgcagctcttcggcaagagctac
atcgagtgcgtgtgcaagatctctgtggactgcaccctgccccgctggcacatgaatgac
ttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatg
tgggactgcatggaggtggcgggccagaccatgtgcctcatcgtcttcatgatggtcatg
gtcatcggcaacctcgtggtgctgaacctgttcctggctctgctgctgagctccttcagc
gccgacagcctggcggcgtcggacgacgacggggagctgaacaacctgcagatcgccatc
ggccgcatcacgcgcggcatcgccctcgccaaggccacgctgctggcgctgctgcgccgc
ctctggaagggcaagaaggtggcaccggaggaagagcaggaccccagcaagagagacaac
tccgtgctcaaccacgtggacacggccctggagcccaagtcagggtacctggatggcatc
acgggcaaggagcacatcttcatggatgagctggaccacatgaacttcatcaacaacccc
aacctgacggtgcaggtccccatcgcctctgaggagtccgacctctacgaggagaccagc
acccagtctgacaccgaggacaccaccaagaaccccctgtgcagcgacaacgcctcgtcc
gtgtgcagcacggtggattacaaaccccccgcgcccgaggaggaggaggtggcagaggag
gctgaggagggcaacgagcccgaggagtgtttcactgaaggctgtgtgaagaggttcccc
tgcctctacgtggacatcaccagtgagaaggggaagatttggtggaacctcaggaaaacc
tgcttccgcatcgtggagcacgactggtttgagaccttcatcgtcttcatgatcctcctc
agcagtggggcactggctttcgaggacatctacatcgagcagcgcaaggtgatccgcacc
atcctggaatacgcagacaaggtcttctcctacatctttgttatcgagatgctgctcaag
tgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctggatttcctc
attgtggatgtgtccctggtcagcctgacagcaaactggctgggatactctgagctggga
gccatcaaatccctgcggacactgagggctctgcgacccctgcgtgctctgtcccgcttt
gagggcatgagggtggtggtgaacgccctggtgggggccatcccctccatcatgaacgtc
ctgctcgtctgcctcatcttctggctgatcttcagcatcatgggggtgaacctgttcgca
ggcaagtactacaggtgtgtcaacaccaccaccggggagctcttcgacatcgacgtggtc
aacaacaagagcgactgcatggccctgctccacaccaacgaggtcagatgggtcaacgtc
aaggtcaacttcgacaacgtgggcttgggatacctgtccctgctgcaggtggcaaccttc
aaaggctggatggacatcatgtacgcagccgtggactcacgtgagattgaagagcagcca
cagtacgagatcaacctctacatgtacatctacttcgtcatcttcatcatcttcggtgcc
ttcttcaccctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaagaaa
aagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaatgccatg
aagaagctgggctccaagaaaccccagaagcccatccccaggccagcgaacaaattccaa
gggaaggtgtttgactttgttaccaagcaagtgtttgacatcaccattatgatcctgatt
tgcctgaacatggtgaccatgatggtggaaacagatgaccagagcgagctcaaaacctct
gtcctctacaagataaatctggtcttcatcgtcatcttcactggagagtgtgtgctcaag
atgtttgccctgcgccactacttcttcactgtgggctggaacatctttgacttcgtggtg
gttatcctctccatcctaggtatcgtcctctcagacatcatcgagaagtactttgtgtcc
cccacgctcttcagggtcatccggctggcgaggatcggccgcgtgctgcggctgatccga
ggagccaaaggcatccggacgctcctctttgccctgatgatgtccctgcccgccctgttc
aacatcggcctcctgctcttcctcgtcatgttcatctactccatcttcggcatgtccaac
ttcgcctacgtcaagaaggagtcggggatcgatgacatcttcaacttcgaaaccttcggg
aacagcatgatctgcctctttcagatcaccacgtcagcggggtgggatgggctcctcaac
cccatcctcaacagcggccccccggactgcgaccctgagctggagaaccccgggagttca
gtgaaaggagactgtgggaaccctgccatcggcatcttcttcttctgcagctacatcatc
atctccttcctcatcgtggtgaacatgtacatcgccatcatcctggagaacttcagcgtg
gccacagaggagagcagcgagcccctctgtgaagatgattttgaaatgttttatgaaact
tgggagaagttcgacccagatgccacccagttcatcgcctacagcaccttgtctgacttt
gtggacaccttgcaggagccactcagagttcccaaacccaacaagatcaaactcatcacc
atggatctaccaatggttgctggggacaaaatccactgcctagacatcctctttgctctg
actaaggaagtgctgggagactcgggagagatggatgccctgaaggccaccatggaggag
aagttcatggctgccaacccctcgaaggtttcctatgaacccatcactaccaccctgaag
aggaagcacgaggaggtgtgtgccaccaagatccagagggcttttcggaggtacctcctg
aggcgctcggtgaagcaggcgtcctacatgtacaggcacagccaggacgcgctgggcgag
gacgcgcccgagaaggaagggctgatcgccaccaaaatgcaggagatctatgggaacact
gggacagatgtggacacagcccctgccctgggcctcgagcccattcccagctcagagacg
ccccaggatgctcctgaggaagcacgggcttggggtaaggaacacgtggtgaaagagtcg
ctggtgtaa
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integrated database retrieval system
