Pyrgilauda ruficollis (rufous-necked snowfinch): 121350770
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Entry
121350770 CDS
T07608
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121350770 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121350770 (SMCR8)
Membrane trafficking [BR:
pruf04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
121350770 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
121350770
NCBI-ProteinID:
XP_041318350
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MISAPDVVAFTREEELEDDLYREPPLPEEYSVPLFPFAGQGANPWAKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSTEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEQQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLRQIRSYPYRKLKDSEFHPYEPECALDRADVGSDQDPTASDPSEPGETHLY
THVPSYTPKLIKAKSAKCFDKKLKTLEELCDVYFFTQTLDQLHHIERTFRGDVCYLLTEQ
ISRALLKQQSVTNFLFEDVSFLDEKPPEKQYRGCQGLGQDVIDEKCSEESLAPKVVISLG
SYKSSVECVPIKMEQEMEGSEEPKMSESVMSEHQENLDYLDADIKGSISSGESIEVLGTE
KPGSGLTKSESQASLPVMASPQAGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYADDDEGGLRFAPRANPGVHDGQDDISKQESLVQVDAACCIGKESPNFLEPLA
ELGQKACEEDGVVRIPPQPYRPAEPALRGGFPSHEGLSGGLLPYELDSRYLTGSREVSKS
SLDECSDSTSYMSSAASTCSDRTPSPAHLACAAGDRHRKRAGQNALRFIRQYPFAHPAIY
SLLSGRTLVVLGEDEAMVKKLVTALSIFVPNCGVYAKPVKHWVTSALHLVDFQKWKLIGL
QRAVSPAGVNVLHALSRYSRYLSILDADSKTLRCPLYKGTVVARLADHRTQIKRGSTYYM
HVQSILTQLCSKAFLFTFCHHLHLPISEREPEESVVNRRMNFLKLQLGLANEDIKIVQYL
AELLKLHYIQEPGQGGNPLLRFDYVPSFLYKI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccagggaggaggagctggaggatgatctg
taccgcgagccgcccctgcccgaggagtactcggtgccgctgttccccttcgccggccag
ggcgccaacccctgggccaaggtcgccggctccaagttcacccgggacttcatcctcatc
tccgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcaccttcgatctcaattatttttccctgcggatcatgtctgtggattaccag
gcatccttcgtggggcaccctcccggctctgcctaccccaagctgaactttgtggaggat
tccaaggtggtgctgggggactccaaggaaggggcctttgcctacgtgcaccacttgacc
ctgtatgacctggaagccaggggctttgtgaggcccttctgcatggcctatatttctgct
gacgagcacaaaatcatgcagcagtttcaggaactttctaccgagttctccaaagcctcc
gaatgcctgaagacggggaaccggaaagcttttgccaacgaactggaaaagaaactgaaa
gatcttgactacaccaggaccgtcctgcacaacgagactgagcaacagaagaaagccaac
gacaaggggtactacacaacccaggccattgagaaggccaacgagctggccagtgtggaa
aagtcaatcatcgagcaccaagacctgctgaggcaaatccggtcgtatccctacaggaag
ctgaaggactctgaattccacccctacgagccagagtgtgccctggaccgggctgacgtg
ggcagcgatcaggacccgactgcctccgacccctctgagcccggtgaaactcacctttac
acccacgtgccatcctacacccccaaactaatcaaagccaagtctgccaagtgctttgac
aagaagctgaagacactggaggagctctgtgatgtttattttttcacccagaccctcgac
cagttgcaccatatcgagaggacttttcgaggggatgtgtgttacctcctgacagagcag
atcagccgggctctcctcaagcagcagagtgtcaccaacttcctctttgaggatgtgtct
ttcctggatgaaaaacctcctgaaaaacagtacagaggctgccaggggctcggccaagat
gtcatagatgaaaagtgttcggaagagtcccttgctcctaaagtggtcatcagcctgggc
tcctacaaatccagcgtggaatgtgtgcccatcaagatggagcaggaaatggagggctct
gaagagcccaaaatgtctgagtctgtgatgtctgagcaccaggagaacctggactacctg
gatgcagatatcaaaggcagcatcagcagcggggagagcatcgaggtgctgggaacggag
aagccggggtctgggctgacaaagtcggagagccaggccagcctgcccgtcatggccagc
ccccaggcgggccgcagcaaggtgggcagccggcgcacggtcagcgaggacagcatcgag
gtgctcagcacgtgtccctccgagtccctcatccccgaggacttcaaagcgagctaccca
agtgccattaacgaggagccctacgcggatgacgacgagggcggccttcgcttcgccccc
agagcgaacccgggcgtccacgacgggcaggacgacatctcaaagcaggaaagcttagtg
caggtggatgctgcctgttgtatcgggaaggagagtcccaacttcctggagcccctggcc
gagctggggcagaaggcgtgcgaggaggacggcgtggtgcggatccccccgcagccgtac
cgcccggccgagccggcgctgcgcgggggcttcccctcccacgagggcctctcggggggg
ctcctgccctacgagctcgactctcgctacctgacgggcagcagggaggtgagtaagagc
agcctggacgagtgctcggactccacgagctacatgagcagcgctgcctccacgtgctcc
gacaggaccccgtctcccgcccacctggcctgcgcggccggggacaggcacagaaagagg
gccgggcagaacgcgctgcgcttcatccgccagtacccctttgcccaccccgccatctac
tccctgctcagcgggaggaccctggtcgtgctgggagaggacgaggccatggtcaagaag
ctcgtgacggcgctctccatcttcgtgcccaactgtggcgtgtacgccaagcccgtgaag
cactgggtcacctccgctctgcacttggtggatttccagaagtggaagttgattggactg
cagagggcagtgtcccctgccggggtgaacgtgctgcacgccctgagccggtacagccgc
tacctgagcatcctggacgccgacagcaagaccctgcgctgccccctctacaagggcacc
gtggtggcccggctggccgaccaccgcacgcagatcaagcgtggcagcacctactacatg
cacgtccaaagcatcctcacccagctgtgctctaaagccttcctcttcaccttctgccat
catttgcaccttcccatcagcgaaagggaaccggaggaatccgttgtgaatcgcaggatg
aacttcctaaagcttcaactgggccttgccaatgaagatatcaaaatcgtgcagtacttg
gccgagctgctgaagctgcactacattcaggaaccggggcagggggggaaccccctgctc
agatttgactatgtccccagctttttgtacaaaatctag
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