Pyrgilauda ruficollis (rufous-necked snowfinch): 121351138
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Entry
121351138 CDS
T07608
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03440
Homologous recombination
pruf03460
Fanconi anemia pathway
pruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121351138 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
121351138 (BRCA1)
03460 Fanconi anemia pathway
121351138 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pruf01009
]
121351138 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121351138 (BRCA1)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121351138 (BRCA1)
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121351138 (BRCA1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121351138 (BRCA1)
Protein phosphatases and associated proteins [BR:
pruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121351138 (BRCA1)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121351138 (BRCA1)
Multi subunit type E3
BRCC complex
121351138 (BRCA1)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121351138 (BRCA1)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
121351138 (BRCA1)
BRCA1-A complex
121351138 (BRCA1)
BRCA1-B complex
121351138 (BRCA1)
BRCA1-C complex
121351138 (BRCA1)
BRCA complex
121351138 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
121351138 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-RING_6
BRCT_3
RING_XB3-XBAT31
zf-RING_5
RTT107_BRCT_5
zf-ANAPC11
TRAF3_RING
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
121351138
NCBI-ProteinID:
XP_041318962
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MELSVITIGQVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLLNKKKKGVV
ECPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLKSHHFAKTSTEATAAES
LCKESSVIQSKGFRNRRKSARGNGQENFTLQEASVNIQLADAKMCHPKNKAQKSGSQKGT
YIEFGSESSEEFFKEASKTGFEDKGAVQISSQVRLEELESAEKGNENSCNAQPDKLCAKE
MALPDIIGEGDFLKECLSKRSTQSITECANPDQVNVTECQSSPLSVLAVDLPPEPCDRAG
DASPTLDGDTSFFKNPEEMEEQQTQHNSENQEFGLEDSSESRLDKSREMDTDVQSVEAVE
GYEPENDSSHDKELPLEELPQPETLHSATLNKVSKKRLKQSIQKVNEWFSKSNEILSSGS
SVDESAASADVSGEGDLCLSDKESCISAKTDPLADSMEIAAVERKKRWSNQKAEDIKDKI
FGKTYKRERKSNPPSTLRDILPTRQKEDVAAAKCLTDVSKDRLKRKRKTACVLQPEDFIK
KKDTEKADGGPQSVSGGLGDAEKKRCDESVAANESHLSQNRANNTLTEAEEGGESTWKKA
AEKITTKHCDGEPEMYNCDQKCTKKRSSAAKRCRHSSRTMCALELVVDRGSVFPDPAEPQ
IDSYPSSGEPRKDDSEQNPVRRSRRLQLLSEEMTKETRKGVKGARNNSDHGRSVSGDQRN
VATHSAECKDLCEPQGELSYRPVTNLEGGDLHANKMQVSLKNLSDTAETRKSLFSPSCLP
SNCGSTVPDTSSQDSKILGSPLLLQLPSVSAGETASHQTEEGTESPIASPPECGHDSQNV
PGDFKAEKLPVAKNVLELTKEAEDSDLDTQYLRNIFRHSKRSSFSLFQTHAVADPPSETL
NLSCAAQVENKASKQLQPESLQEERAAAQNLSRVSEKEKLKTCESARVDPVPCFAVSTGG
HRDGISQAAEEGTLTPARAGTAQTEHNKGLLQEEQGNEKPVSTEIGIESELRQNPIESGG
SQSDQSNSEKHDSRQNDLNTGQENNLSSESSQAGKTEFDCTGPILHFQSTSMICSATCQQ
SPAEFSCEVTNTKSSKREREHVKGGEEEAAQTVSTAAEALEEPLGENCGLTGLSETPNAL
LCSETDIEENTSLCETDRKEQSAVFVKSDSALGKELHSRNASSKPRSRGPRRSRRRVQKL
PSSDEESCEEEDLPCFRTLIFSKSASTPLQTDKQMAPVVGSPVAECPGSPSVLPHSVSDG
GEVVQKASEAALSHVCASPSQESECSVNLFSSQSNMSEESLNGAQELNKHLPQAQVSKQM
SSGNDSKETSQDSGEGLKETKDESQEDPDMGANLGEASGSDSEISIVEDSCGPFSQGEIL
TTQQKNAMQNSLKKLQQEMAALEAVLEQNGSQNCEVLPVYRELPHSSTEGASERDQMSKE
INRSPELLLSSSKSSLKKRPDLEKGPECDSVLQTKTPSEKTKPVQEAVQEHRQCQLEAEN
TEEQKSGSRQNSASVSSDLFGNVTQTPDNSPSSVRLFTPQTAEAPAGPVMAQNTDKSCGP
GHKLKRSESFPVPVLHNATGKENTTNPGVTKRKEMSVVVSGLNHSEHLVVQKFVKKTQST
LSNHITEGTTHVIMKTDEELVCERTLKYFLGIAGGKWVVSYQWIIQSFKAGRILDEENFE
VRGDVINGRNHQGPKRARQALTEKIFKDFEICCCGPFTDMTTEHLEWLVELCGASVVKQP
DLFTPTANSTAVVVVQPDAWKENVDCRAIQQHSKVAVVTREWVLDSVACYQCQELRAYLV
S
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggaattgtcagtgattactattggacaagtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcctggatgtggtgcaggagcctgtttcaacaaaatgtgat
cacatattctgcagattctgcatgttcaaacttctcaacaaaaagaaaaaaggcgtggtg
gagtgtcctctgtgtaagactgaagttaccaaaagaagtctgaaagaaaattccagattt
aagcaactaattgaaggactcttggaaactatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttgctaaaacatccacggaagccactgctgctgagtcc
ctgtgtaaagaaagttctgtcatccaaagtaaaggcttcagaaacaggaggaaaagtgct
agaggaaatggacaagaaaacttcaccttgcaggaagctagtgtgaatattcagctcgca
gatgccaaaatgtgtcacccaaaaaacaaagcccagaaatctggttctcaaaagggtact
tacatagagtttggctctgaatcatctgaagagttttttaaagaggccagcaaaactggg
tttgaagacaaaggagcagttcagatttcctctcaagtaaggctggaagagcttgagagt
gctgagaaagggaatgaaaattcttgtaatgcacagcctgacaagctgtgtgccaaagaa
atggcactaccagatatcataggtgaaggtgatttcttaaaggaatgtttgagcaagaga
agcactcagagcatcactgaatgtgccaaccctgaccaagtgaatgtgactgaatgccag
agttctcctctgagtgttcttgctgtagacctgcccccagagccgtgtgacagagcaggt
gacgccagtcccacactggatggggacacatcattctttaagaacccagaagaaatggag
gaacagcaaacccagcacaacagtgaaaaccaagagtttggtttagaagatagctcagag
agcaggctggataaaagcagggaaatggatactgatgtgcaaagtgtggaagctgtagag
ggatatgaacctgagaatgactcttcccatgacaaagaacttcctctggaggagctgcct
cagccagagacacttcactctgccaccctgaataaagtctccaagaagagactgaagcag
agcattcagaaagtcaacgaatggttttcaaaaagcaatgagattttgtcttctggttct
tcagtggatgaatctgctgcatcagctgatgtttcaggtgaaggagatctgtgtttatca
gataaagagtcctgtatttcagcaaagactgaccctctggcagattccatggaaattgca
gcagtggaaaggaaaaagagatggtcaaaccaaaaagcagaggacatcaaagataaaata
tttggcaaaacatacaagagagagaggaaatcaaatcccccttctactttgagagacatt
ttgcctactaggcaaaaggaagatgtggctgctgctaagtgcctgactgatgtcagcaaa
gacagactcaaacgaaagaggaagactgcctgtgtcctgcaacctgaggatttcatcaag
aaaaaagatacagaaaaggcagatgggggccctcaaagtgttagtgggggccttggagat
gctgaaaagaaaagatgtgatgaaagtgttgctgctaatgagagtcacctctctcagaac
agagcaaataatacattaacagaagctgaggaaggaggagagtccacatggaagaaagct
gctgagaagatcactaccaagcactgtgatggggaaccagagatgtataactgtgatcag
aaatgcaccaaaaagagaagttctgcagcaaaaagatgcaggcattctagcagaactatg
tgtgctctagagttagtagtggacagaggctctgttttccctgatccagctgagccacag
attgacagctatccaagcagtggagagcccaggaaagatgattctgagcaaaacccagtc
agacgcagcagaaggcttcagttactctctgaagaaatgacaaaagaaaccaggaaagga
gtaaagggagccagaaataacagtgatcatgggaggtctgtctctggagaccaaaggaat
gtggcaactcactctgctgaatgcaaagacctgtgtgagcctcaaggtgagctgagttac
aggcctgtcactaatttggagggaggtgatctgcatgcaaataaaatgcaggttagtcta
aagaatttatctgacactgcagaaactagaaaaagtctgttcagtccttcatgtctgcct
tcaaactgtggttccactgttcctgatacaagttctcaagacagtaaaatacttggtagc
cccctcctcctacaacttccttcagtgtctgctggggaaactgcttctcaccagactgag
gaggggactgaatcacctattgcttctcccccagaatgtgggcatgattcacaaaatgtt
ccaggggacttcaaagctgagaagttgccagtggctaaaaatgttttggaattgactaag
gaagctgaagacagtgacttggacacacagtatctgaggaatatattcaggcattccaag
cgctcatccttcagcctttttcagactcatgcagtggcagatcctccttctgaaacttta
aatctatcatgtgctgctcaggtggaaaataaggctagcaaacagttacaaccagaaagc
ttgcaagaggagagagcagctgctcaaaacttgagcagggtttctgagaaagagaagctt
aagacctgcgagtctgcacgtgttgatcctgtgccttgctttgctgtcagcacaggaggg
cacagggatggcatttcacaggctgcagaggaagggactctgacaccagcaagagcaggg
actgctcagactgagcacaacaaaggattgctgcaggaagagcagggcaatgaaaagcca
gtgtcaactgagataggaatagaaagtgagttgagacagaatcccattgaaagtggtgga
agccagagtgatcagagcaactcagagaagcatgattccagacaaaatgatttaaacaca
ggccaggaaaacaacctcagttcagaaagcagtcaagcaggaaagactgaatttgattgc
acaggaccaattctacattttcaatccacatcaatgatttgttctgcaacttgtcagcaa
agccctgctgaattcagctgtgaagtcactaacacaaaaagtagcaaaagagaaagagaa
catgtaaaagggggtgaagaagaagcagcccaaactgttagcacagctgcagaggctctg
gaagaacctcttggagagaattgtggtcttacaggtttgtctgaaacccctaatgcctta
ctgtgctctgaaactgacattgaggagaacaccagcttgtgtgaaactgataggaaagag
caatctgcagtgtttgtaaaaagtgacagtgccctgggaaaagaactgcacagtagaaat
gcaagttctaagccaagatctcgaggtcctcgaaggtctcgaagacgagtgcagaaactg
ccatcttcagatgaggagtcctgtgaggaggaggacttaccatgctttaggacattgatc
ttcagcaaatcagcaagcacacctttgcagactgacaaacaaatggcacctgtggtaggg
tctccagtggcagagtgtccagggagccccagtgtgctgcctcacagtgtgagtgacggt
ggcgaggttgtgcagaaagcgtctgaagctgccctaagtcatgtctgtgcttcaccaagc
caggagtcagaatgctctgtcaacttattttcttcccagtccaacatgtctgaggaatca
cttaatggagcacaagaactgaacaaacatttaccacaagctcaggtgtccaaacaaatg
agcagtggaaatgacagtaaagaaacttctcaggattctggtgaagggctgaaggagacc
aaagatgaaagccaagaagacccagacatgggagcaaatctaggtgaagcttctggatct
gacagtgaaataagtattgtggaggattcctgtggaccattctctcagggtgaaatcctc
actacacagcaaaagaatgctatgcaaaatagcctgaagaaacttcagcaagaaatggct
gcacttgaagcagtgctagagcagaatgggagtcagaactgtgaggttttacctgtctac
agggaactgccacattccagtactgaaggagcatctgaaagggatcaaatgagtaaagaa
ataaacaggtctccagaattgttgctttcatcttctaaatcctctttaaagaagagacca
gatctggagaaaggccctgagtgtgacagtgttctacagaccaaaactccctctgaaaag
acaaaacctgtgcaggaggcagtgcaagaacacaggcagtgtcagcttgaagcagaaaat
acagaggagcagaaatctgggagcagacaaaacagtgcatctgtctcatcagatcttttt
gggaatgtgacccagactccagataactctccctcctctgtgaggctttttacccctcaa
actgcagaagccccagctgggcctgtgatggctcagaacactgataaaagctgtggccca
ggacacaaattgaagagaagtgaaagttttcctgtacctgttctgcacaatgcaactggg
aaagaaaatactacaaatccaggggtgaccaagaggaaagaaatgtcagttgtggtctca
ggtctaaatcacagtgagcatttggtggtccagaagtttgtgaaaaaaactcagagcact
ttatctaatcacattactgaaggaacaacccatgtcataatgaaaacagatgaggagctg
gtgtgtgaacggaccctgaagtatttcctgggcattgcaggaggaaaatgggtggttagt
taccagtggataattcagtcttttaaagcaggaagaatactagatgaggagaactttgaa
gtcaggggagatgtaatcaatgggagaaaccatcaaggtcccaagagggccagacaggcc
ctgactgaaaagatctttaaagactttgagatctgttgctgtggacccttcactgacatg
actacagagcatctggagtggctggtggagctctgtggtgcctctgtggtgaagcagcct
gacctgttcacacccacagcaaattctactgctgttgtggttgtgcagccagatgcttgg
aaggaaaacgtggattgtagagcaatccagcagcacagcaaggttgccgtggtaactcgg
gagtgggtcctggacagcgtggcttgctaccagtgccaggagctccgtgcttacctcgtg
tcctag
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