KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121351471
Entry
121351471         CDS       T07608                                 
Name
(RefSeq) LOW QUALITY PROTEIN: class II histocompatibility antigen, B-L beta chain-like
  KO
K06752  MHC class II antigen
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04145  Phagosome
pruf04514  Cell adhesion molecules
pruf04672  Intestinal immune network for IgA production
pruf05164  Influenza A
pruf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121351471
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121351471
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    121351471
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    121351471
   05168 Herpes simplex virus 1 infection
    121351471
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pruf04147]
    121351471
Exosome [BR:pruf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121351471
  Exosomal proteins of epithelial cells
   121351471
  Exosomal proteins of breast milk
   121351471
SSDB
Motif
Pfam: C1-set MHC_II_beta
Other DBs
NCBI-GeneID: 121351471
NCBI-ProteinID: XP_041319547
LinkDB
Position
Unknown
AA seq 307 aa
MGRGAAAGAALLALLLLGAPPAAGAELSGLFQWIAKAECHFINGTDRVKYAERHSYNREQ
LLHFDCDKVGHLGVRPLWGEGGRLLEQPPGFHAAQKDRGALVLAEQLGGGRRVPQGAPSA
HPTVSISLAPSSSQPGPGCLLCSVMDFYPAHIQLRWFQGQQELSVVATDVVPSGDWTHQL
LVLLETXPQCGVTCSCQVEHVSLEHPLSQHWEMPLDAAHSKMLTGVGGSVLGFVFLALGF
GFYLCKKVRGGPGGRVPPLPGACVLPPGPPAQCHPLFSAHRAPEPPPAAAPPRGLGPGRD
PPAPSPP
NT seq 924 nt   +upstreamnt  +downstreamnt
atggggcggggggcggcagctggggccgcactgctggcactgctgctgctgggagccccc
ccggctgcgggcgcggagctctcggggctgttccagtggattgcaaaggctgagtgtcac
ttcattaacggcaccgacagggtgaagtacgcggagaggcacagctacaaccgggagcag
ctcctgcacttcgactgcgacaaagtggggcacttgggggttcgccccctttggggagaa
ggtggccggctactggaacagcctcccggatttcatgcggctcaaaaggaccgcggtgca
ctggtactggcggagcaactcggaggtggccgccgtgttcctcagggagcgccgagtgcc
catcccaccgtgtccatctcgctggcaccctcgagctcccagcccggccccggctgcctg
ctctgctccgtgatggatttctaccctgcccacatccagctgaggtggttccagggccag
caggagctctctgtggtggccaccgatgtggttcccagtggggactggacccaccagctc
ctggtgctgctggaaactngcccccagtgcggggtcacctgcagctgccaggtggagcac
gtcagcctggagcatcccctgagccagcactgggagatgccgctggatgccgcccacagc
aagatgctgacaggggtcggggggtccgtgttgggcttcgtcttcctggctctggggttc
ggcttctacctgtgcaagaaggtgagggggggtcccgggggtcgtgtcccccctctcccg
ggagcgtgtgtgctccccccggggcccccagcccagtgtcacccccttttctctgcccac
agagctcctgagccgccgccggccgcagcccctccccgtggcctcgggcccggccgggac
ccccctgctccatccccgccctga

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