Pyrgilauda ruficollis (rufous-necked snowfinch): 121352739
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Entry
121352739 CDS
T07608
Symbol
NPC1L1
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pruf02000
]
121352739 (NPC1L1)
Transporters [BR:
pruf02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
121352739 (NPC1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
NPC1_MLD
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
121352739
NCBI-ProteinID:
XP_041321854
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MAASLALPGALLAALLALELAVAECGDNVVVPTGCHLEEAKVPELWRPLRGAHRVPLAPQ
GATTVPPSPSPQASPSLTPVRQAGVCAFYGECGRNPEVNVSLVPSKVPCLSNTPARVAQG
ALLSLLRSVCPELARGDNETTRVCCSYGQLSALRVSVGLSGAVLARCPACARNFANLYCH
NICSPDQSLFTNVTRVANYTAVPGARAVLEYQLFYSRRYAEAAFASCQGVRLPATGGYAI
STMCGRYGAQLCTAQRWLDYQGNKNNGLAPLQINFQLLPNGSEPGQGIVPLDAPAWGCDQ
APGADQEPCSCQDCAQACPPVVPPADPPPPFRIGRADGVLVICVLLFAALALAFLVAVLC
QRGAAEVALKPRARGCPQRASEAWQRGLERAFRRWGTAVATRPVAVLAVAVVVAGGLSAG
LVTLQLTTDPVELWSAPGSRARQEKEFHDRHFGPFLRTNQVIVTAPGRPGTTYDSVVLGT
KNFSGVLAQDVLLALLELQETLAGTTAWAPGAGRNVSLQDVCYAPLNPAAPGVGDCAVNS
VTQYFQNNRSRLALSAWQQDSKEQGTVDWHDHLMYCVNSPLSFKDITALELSCMAEYGAP
VFPYIALGGYRESEYTEAEALIVTYSLNNFPAGDPRLEWALSWERQFLRVVRDFQRRHGR
DLSVTFMAERSLEDEINRTSGEDLPVFATSYLLVFAYIALALGEYTAWRRVESKVTLALG
GIAVVLGAVLAAMGLLALLGLRSSLIIIEVVPFLVLAVGADNIFIFVQELQQSQQEPGET
REQHLGRVLAQVAPSMLLCSLSETVCFLLGALSSMPAVRTFALTAALAIALDFALQMSGF
VALVALDRRRQEAGRFDLCCCCGKGKGGTAGAGRGLLRPLLERFYTPVLLHPLVRPAVVL
LFLFLACAGLFLLFHVSVGLDQELALPEDSYLLPYFSELNRYLAVGVPTYFVTTSGYNFS
SENGTNAICSSAGCDADSLTQSIQLATRFPNVSYLAIPATSWLDDFLDWLNPTVRCCRIH
QSGEHKGEFCPSTSTDPSCALGQCLKRLRRPTAEEFQRFLPWFLQDRPTLQCAKGGLGAY
DTAVSMDANGTILATRFMAYQRPLRTSQEYTGALRAARALAERITGTLRAVPGTDPAFRV
FPYTVTYVYYEQYLTVVPEGLVTLALCLVPTFAVSFLLLGMDVRSSLATLLTIAMALLGT
VGCMALWAVPYNAVALINLVAAVGISVEFVSHITCAFARSRQPTRVARAAEATVTMGSKV
VAGVAMTNLPGVAVLAFAKARLVRIFFFRLNLIVTVLGLAHGLAFLPVLLSYIGPAPQVP
AGEDTPGDTVQGTRLGLGNPCFKDTDTDTDKDKDRDKDKDKGSAKG
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccctggcactgcccggcgcgctcctggccgcgctcctggcgctggaactg
gcggtggcggaatgtggggacaatgtcgtggtgcccaccgggtgccatttggaggaagcg
aaggtgccagagctgtggcgacccctccgcggtgcccaccgggtccccctcgcccctcaa
ggtgccaccaccgtgcccccgtccccgtccccgcaggcgtcgccgtcgctgacccccgtg
cgccaggccggcgtctgcgccttctacggcgagtgcgggcgcaaccccgaggtcaacgtg
tcgctggtgccctccaaggtgccctgcctgtccaacacgccggcgcgggtggcgcagggc
gcgctgctgtccctgctgcgctccgtgtgccccgagctggcgcggggggacaacgagacc
acgcgggtgtgctgcagctacgggcagctgagcgcgctgcgcgtcagcgtggggctgtcg
ggcgccgtgctggcgcggtgcccggcctgcgcccgcaacttcgccaacctctactgccac
aacatctgcagccccgaccagagcctcttcaccaacgtcacccgcgtggccaactacacg
gcggtgcccggcgcccgggccgtgctggagtaccagctcttctacagccgccgctacgcc
gaggccgccttcgcctcgtgccagggcgtgcggctgccggccacgggcggctacgccatc
tccaccatgtgcgggcgctacggcgcccagctgtgcacggcccagcgctggctggactac
cagggcaacaagaacaacgggctggcgccgctgcagatcaacttccagctgctgcccaac
ggctccgagcccggccagggcatcgtcccgctggacgcgcccgcctggggctgcgaccaa
gcgcccggcgccgaccaggagccgtgctcgtgccaggactgcgcccaggcctgcccgccc
gtggtgccgcccgccgacccgccgccgcccttccgcatcggccgcgccgacggcgtgctg
gtcatctgcgtgctgctcttcgccgcgctcgccctggccttcctggtggccgtgctgtgc
caaaggggcgcggccgaggtggcgctgaagccgcgtgcccgcgggtgcccgcagcgggcg
agcgaggcctggcagcgcggcctggagcgggcgttccgccgctggggcacggcggtggcc
acgcggccggtggccgtgctggcggtggccgtggtggtggccggagggctctcggccggg
ctggtgaccctgcagctgaccacggaccccgtggagctgtggtcggcgccgggcagccgt
gccaggcaggagaaggagttccacgaccgccacttcgggcccttcctgcgcaccaaccag
gtgatcgtgacggcgccggggcgccccggcaccacctacgactcggtggtgctgggcacc
aagaacttcagcggggtgctggcccaggacgtgctgctggcgctgctggagctgcaggag
acgctggcgggcaccacggcgtgggcaccgggcgcgggcaggaacgtcagcctgcaggac
gtgtgctacgcccccctgaaccccgcggcgcccggcgtgggcgactgcgccgtcaacagt
gtcacgcagtacttccagaacaaccgcagccgcctggcactcagcgcctggcagcaggac
agcaaggagcagggcaccgtggactggcacgaccacctcatgtactgcgtcaactccccg
ctctccttcaaggacatcacggcgctggagctgagctgcatggccgagtacggcgcgccc
gtgttcccctacatcgccctgggcggctaccgcgagtcggagtacacggaggccgaggcg
ctgattgtcacctactcgctgaacaacttccccgcgggggacccgcgcctcgagtgggcg
ctgagctgggagcggcaattcctgcgcgtggtgcgcgacttccagcgccgccacggccgc
gacctctcggtcaccttcatggctgagcgctctctggaggacgagatcaaccgcacgagc
ggggaggacctgccggtgttcgccaccagctacctgctggtgttcgcctacatcgcgctg
gccctgggcgagtacacggcctggcggagggtggagtccaaggtgacgctggcgctgggg
ggcatcgcggtggtgctgggggccgtgctggccgccatggggctgctggcgctgctgggg
ctgcgctcgtccctcatcatcatcgaggtcgtgcccttcctcgtgctggccgtgggcgcc
gacaacatcttcatcttcgtgcaggagctgcagcagtcgcagcaggagccgggcgagacg
cgggagcagcacctggggcgggtgctggcacaggtggcaccgagcatgctgctctgcagc
ctctccgagaccgtctgcttcctcctcggtgccctctcgtccatgccagccgtgcggacc
ttcgccctcacggccgcgctcgccatcgcgctggacttcgcgctgcagatgtcggggttt
gtggcactggtggcgctggacaggcggcgacaggaggccgggcgcttcgacctctgctgc
tgctgcgggaagggcaaggggggcacggccggggcgggcagggggctgctgcgccccctc
ctcgagcgcttctacacccccgtgctgctgcaccccctcgtgcggcccgccgtggtgctg
ctgttcctgttcctggcctgcgccgggctcttcctgctcttccacgtgtccgtggggctg
gaccaggagctggcactgcccgaggactcgtacctgctcccgtacttctcggagctgaac
cgctacctggccgtgggtgtccccacctactttgtcaccacgagcggctacaacttctcc
tcggagaacggcaccaacgccatctgctccagcgccggctgcgacgccgactcgctgacg
cagagcatccagctggccacgcgcttccccaacgtgtcctacctggccatcccggccacc
tcgtggctggacgatttcctggactggctgaaccccacggtgcgctgctgccgcatccac
cagagcggggagcacaagggcgagttctgcccctccaccagcactgaccccagctgcgcc
ctgggccagtgcctgaagcggctgcggcgccccacggccgaggagttccagcgcttcctg
ccctggttcctgcaggaccggcccaccctgcagtgcgccaagggtggcctgggcgcctac
gacaccgcagtgagcatggacgccaacggcaccatcctggccacgcgtttcatggcgtac
cagcggccgctgcgcacgtcccaggagtacacgggtgccctgcgcgccgcccgcgccctg
gcagagcgcatcacgggcaccctgcgcgccgtgcccggcaccgaccccgccttccgcgtc
ttcccctacacggtgacgtacgtgtactacgagcagtacctgacggtggtgcccgagggg
ctggtgacgctggcactgtgcctggtgcccaccttcgccgtgtccttcctgctgctgggc
atggacgtgcgctccagcctggccacgctgctgaccatcgccatggcactgctgggcacc
gtgggctgcatggcgctctgggcagtgccctacaacgccgtggcactcatcaacctcgtg
gcggccgtgggcatctcggtggagttcgtgtcccacatcacctgcgccttcgcccgcagc
cgccagcccacgcgggtggcacgagccgcggaggccactgtcaccatgggcagcaaggtg
gtggcgggggtggccatgaccaacctgccgggggtggcggtgctggcgttcgccaaggcg
cgcctggtgcgcatcttcttcttccgcctcaacctcatcgtcaccgtgctggggctggca
cacggcctggcattcctgcccgtgctgctcagctacatcgggcccgcgccgcaggtgcca
gcaggggaggacacgccgggggacaccgtgcaggggacacggctgggcctgggcaacccc
tgcttcaaggacacggacacggacacggacaaggacaaggacagggacaaggacaaggac
aaggggtccgcgaagggctga
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