Pyrgilauda ruficollis (rufous-necked snowfinch): 121353495
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Entry
121353495 CDS
T07608
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf00310
Lysine degradation
pruf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121353495 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121353495 (SETDB1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
121353495 (SETDB1)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121353495 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121353495 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
YkyA
Motif
Other DBs
NCBI-GeneID:
121353495
NCBI-ProteinID:
XP_041323313
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MDSQDIKELQEEVMEELGISMEELREIIDKEVENSEWVRQRKQQLEELEQCMRHKEEEVA
HVDQLIDDAVRAMDKCETLAKELYSMMGLQYRESSSEDEAPAATEVIEIPDEEDDDVMSV
DSGWKRSSSSPRISRDQSLLREAMAAMRKSARDVAKFMDAVNKKTNLQEAQKDAQPPQEP
PGTAQPVTVPAAPSNDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQPVGAGKKYKVKFD
NKGKSLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNVKNKDRFLI
FFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIK
TEWEGTWWKSRVEEVDGSLVKILFLEALPMGTAGVSFSFPQEDRRCEWIYRGSTRLEPMF
SMKTSASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGAGPQYKAPEPAARPASPQP
AEMECSDTQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLGDTPAAGRALPAPQHRVPS
SVPSSVPSQPFHGMMDRVPNEPSYRAPLEKTFYFPHVCNYDCLARVRPVRSDQYRSRNPL
LIPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMHEIERYLFETDCDFLFLEMFCL
DPYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYIN
TSWEFLVGCDCKDGCRDKSRCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTGVYE
CNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDD
FADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDEEDNTGTEEL
EESNEDSSDDNFCKDENFGASSVPRSYATRRQTRGQRDHGPSEAASKDLGLTRPLGHEEP
ATAPPCKLPVSEEISKNKVASWLSSNNVAESFQDSDSASSFRVGEGGEGKAVKMEISVER
EKGCASTPGDLNGEAKVAKKEEPEESTKIPGLSSLGRRYGYNPCPPRLEGIRRPLSGTVL
LQSRRRSLAPPPTSENVLMVSSSTDSDEEHRAGQAPGTANDSDDIQTISSGSEEEEDKKN
PSSGSAGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQFYDGEE
NCYIIDAKLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDY
NYEVGSVEGKELLCCCGAIDCRGRLL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaggacatcaaggagctgcaggaggaggtgatggaggagctgggaatctcc
atggaggagctccgggagatcatcgacaaagaagtggagaattccgagtgggtgaggcag
cggaagcagcagctggaggagctggagcagtgcatgaggcacaaggaggaggaggtggcc
cacgttgaccagctcattgatgatgctgtgagggccatggacaagtgcgagacactggcc
aaggagctgtactccatgatgggcctgcagtaccgggagagcagctcggaggacgaggca
ccggcggccacggaagtgatcgagatcccggacgaggaggacgacgatgtcatgagcgtg
gactcgggctggaaacgcagcagcagcagtcccagaatctccagggatcagagtctgctg
agggaagcaatggctgccatgaggaaatctgcccgggatgttgcaaaattcatggatgct
gtaaacaagaaaaccaacttgcaggaagcacagaaagatgcacagccccctcaggaacct
cctggcactgcccagcctgtcactgtccctgcagcccctagcaatgatctcaacactgat
ggggacctcaaagtgggcatgaggattttggggaaaaaaagaaccaagacgtggcacaag
gggacgttgattgccatccagccagttggtgctggcaagaaatacaaagtgaaatttgat
aacaaaggaaagagtttgctctcgggcaaccacattgcctacgattaccacccgtctgct
gagaggcaccacgtgggcaggagggtggtggccaggtacaaggatggcaatcagatgtgg
ctctatgctggcatcgtggctgagacccccaatgtcaagaataaagacaggttcctgatc
ttcttcgacgatggctacgcgtcgtacgtgaaggagtgggagctgtacccagtctgcagg
ccactgaaaaaagcctgggaagacattgaggatgtttcctgccgggatttcattgaggaa
tacatcactgcctaccccaaccgacccatggtgctgctgaagaatgggcagctgatcaaa
accgagtgggaagggacctggtggaaatccagagtggaagaagtggatggaagtctggtg
aaaatccttttcctggaagctcttcccatgggaactgcaggtgtttccttctcattccca
caagaggacagacgttgtgagtggatttaccgaggttccacacgcctcgagcccatgttc
agcatgaaaacttcagcttccacccaggagaagaagcagagtgggcaaaccaggactcgt
cccaacgttggtgctgtgaggagcaagggccctgtggtgcagtacacccaggatttagca
ggagctggtccccagtacaaggctccagagccagctgcacgtcctgcatctcctcagcct
gcagagatggagtgctccgacacccagctggcccagggcagaaagcaggtggccaagaaa
agcacttccttccgtcctggctccgtgggctccgggcactcgtccccatcctcccctgtc
ctcggggacaccccagcagctgggagggccctcccagccccgcagcaccgcgtccccagc
agcgtccccagcagtgtcccctcccaacccttccacgggatgatggatcgcgttcccaac
gagccttcctaccgcgcccctctggagaaaaccttctacttcccccacgtgtgcaactac
gactgcctggcgcgggtgcggccggtgcgcagcgaccagtaccgcagccgcaacccgctg
ctcatcccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtcaaccgcaag
atgggcttccacgtgctctacaaaacgccctgcgggctctgcctgcgctccatgcacgag
atcgagcgctacctcttcgagacggactgcgacttcttgttcctggagatgttctgcctg
gatccctacgtgctggtggatcgcaagttccagccttacaagccctactactacattgcg
gacatcaccaagggcaaggaggacgtgcccctgtcgtgcgtcaacgagatcgacaacacg
ccgccgccgcaggtggcttacagcaaggagaggatccccgggaaaggggtgtacatcaac
accagctgggagttcctcgtgggatgtgactgcaaggatggctgcagggacaaatccagg
tgtgcctgtcaccagctgaccatccaggccagtggctgcacccctggaggacaaatcaac
cccaactcaggctaccagcacaagcggctggaggagtgtcttccaacaggtgtttatgag
tgcaacaagaggtgcaagtgcaacgtgaacatgtgcaccaaccgcctggtccagcacggc
ctccaggtgcggctgcagctcttcaagacccagaacaaaggttggggcattcgctgcctc
gacgacatcgccaagggctcctttgtctgcatctacgcagggaaaatcctgacggatgac
ttcgctgacaaagaggggctggagatgggtgacgagtactttgccaacctggaccacatc
gagagcgtggagaacttcaaggagggctacgagagcgacgccaagtgctcctcggacaac
agcggcgtggacctcaaggacgacgacgacgaggaggacaacacgggcacggaggagctg
gaggaatccaatgaggacagctccgacgacaacttctgcaaggacgagaacttcggcgcc
agctcggtgccgcgcagctacgccacgcgccggcagacgcgcggccagcgcgaccacggc
ccctcggaggcggcctccaaggacttggggctcacgcggcccctcggccacgaggagccc
gccacggctcccccctgcaagctgcccgtgtctgaggagatctccaagaacaaagtggcc
tcgtggttgagctctaacaacgtggctgagagcttccaggacagtgacagcgcctcgtcg
ttcagggtgggagaagggggagaaggcaaggctgtgaagatggagatctctgtggaaagg
gagaagggctgtgcttccacgccaggagatctgaatggagaggcgaaggtggccaagaag
gaggaacctgaagaatcaaccaaaattcctgggctgagcagcctgggaaggaggtatggc
tacaacccctgccctcccaggctggaggggatccgcaggccgctgagcgggacggtgctg
ctgcagagccgccggcgatccctggccccaccgcccacctcagagaatgtgctgatggtg
tcgagcagcaccgacagcgacgaggagcacagggcagggcaggccccgggcacagccaac
gacagcgacgacatccagaccatttcctcaggatctgaggaagaggaggacaagaaaaat
ccatcatctgggtcagcaggtcccgtgaagagacaggtggccgtgaaatccacccgaggc
ttcgccctgaaatccacgcacggcatcgccatcaaatccacgccgctggcggcggccgac
aagggcgagagcgcggggcccgtgcgccgcagcacgcggcagttctacgacggcgaggag
aactgctacatcatcgacgccaagctcgagggcaacctgggccgctacctcaaccacagc
tgcaccccaaacctcttcgtgcagaacgtcttcgtggacacccacgaccttcgcttcccc
tgggtcgccttctttgccagcaagcggatcagagctggcacagagctgacctgggattac
aactacgaggttggcagcgtggagggcaaggagctgctgtgctgctgcggggccatcgac
tgccggggccggctgctctga
DBGET
integrated database retrieval system