Pyrgilauda ruficollis (rufous-necked snowfinch): 121354417
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Entry
121354417 CDS
T07608
Symbol
FBN1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04350
TGF-beta signaling pathway
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121354417 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121354417 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121354417 (FBN1)
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121354417 (FBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121354417
NCBI-ProteinID:
XP_041324972
LinkDB
All DBs
Position
Unknown
AA seq
2864 aa
AA seq
DB search
MWRGRLLGIALGVAVLWASQAGAAAAGHTEGVSAKESRSSRAKRRGHGGGHDALKGPNVC
GSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPNGQIAPSCGSKSIQHC
NIRCMNGGSCSDDHCLCQKGYTGTHCGQPVCENGCLNGGRCVAPNRCACTYGFTGPQCER
DYRTGPCFTLVTNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNI
RTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVTQKCDDIDECSTIPGIC
DGGECSNTVSSYFCKCPPGFYTAPDGLKCIDVRPGFCYSTLSNGRCGSQLPQPLSKMQCC
CDSGRCWSSAPATAPEMCPIRSTDEYRKLCTVAAMLPARPDLPPARPDIIPPPLIPDVYP
PPHPEIIYPSRAPPVHPILPVNLTDYCQTFRHLCRNGRCIPTPGSYRCECNKGFQLHGRE
ECLDIDECERNPCIGGDCVNTQGSYICQCRVGYQSTATRTECRDIDECLQNGRICNNGRC
INTDGSFHCVCNAGFQVAVDGKNCEDMDECSIRNICLNGMCINEDGSFKCICKPGFQLAS
DGRYCTDINECETDGICMNGRCVNTDGSFRCECFPGLAVGLDGRVCVDTHMRSTCYGGYK
RGQCVRPLTGAVTKSECCCASTDYAFGEPCQPCPAQNSAEYQALCSSGTGMTAGGNDINE
CLLDPDLCPNGRCENLHGTYKCYCDPGYEVDSTGKNCIDIDECALNMLLCDNGQCRNTPG
SFTCTCPKGFVYTPDLKTCEDIDECESNPCVNGVCKNTPGSFVCECSPESTLDPTRTICI
ETVKGTCWQNIVNGRCEININGATLKSQCCSSLGAAWGSPCTPCERDPICQKGYSRIRGT
LCEDVNECEVFPGVCTNGQCVNTLGSFVCQCPNGMTLDASGRTCLDIRLESCYLQHEDEQ
CTSQIPGRHRMDACCCSVGAAWGYECEECPLRGTPEFEALCPRGPGFSTKIEISGKPFSK
DINECKMFPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGQGICV
NTPGDFECECFEGYESGFMMMKNCMDIDECQRNPLLCRGGTCINTEGSFRCDCPPGHQIS
PNISACVDINECELSSNLCRNGRCVNLIGKYQCACNPGYQSTQDKLYCIDIDECQIMNGG
CEDFCTNSEGSYECSCKQGFALMPDHRTCTDIDECEDNPNICDGGQCTNIPGEYRCLCYD
GFMASEDMKTCIDVNECDLHPNICLSGTCENTKGSFICHCDMGYSGKKGTTGCTDINECE
IGAHNCDRHAICTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSPHADCKNTMGSY
RCLCKEGYTGDGFTCTDLDECSENLNLCENGQCLNAPGGYRCECDMGFLPSVDGKACEDI
DECSLPNICVYGTCHNLPGLFRCECEVGYELDRSGGNCTDVNECADPTTCISGTCINTAG
SYTCECPPDFELNPTRVGCVDTRSGNCYLDIKTRGDNGGTFCSNEIGVGVSKASCCCSLG
KAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFG
SFQCQCPSGYYLNEETRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDYMQVNGGNNC
MDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFSTL
CGSQRPGFFIDIYTGLPVDIDECREIPGVCENGICINMVGSFRCECPVGFFYNDKLLICE
DIDECQNGPVCQQNAECVNTAGSYRCDCKPGYRFTSTGRCTDRNECQEIPNICSHGQCID
TVGSFYCICHNGFKTNDDRTMCIDINECERDACGNGTCRNTIGSFNCRCNLGFILSHNND
CIDVDECASGNGMLCRNGQCVNTIGSFQCLCNDGYEVALDGRTCVDINECALEPGKCSPG
TCQNLDGSFRCICPPGYILQNDKCEDIDECVEQPEICALGTCSNTPGSFKCLCPEGFVLS
STGRRCQDLRVSYCFTKFEDGKCSVPKSRNHSKQECCCALKGQGWGDPCELCPEEADEAF
RQICPFGIGILVGPGDARLDVDECLDPDNCKFGQCINTDGSFRCECPYGYILQGAECVDT
DECAVGNPCGNGTCRNVIGGFECTCVEGFEPGPMMTCEDVNECIQNPLLCAFRCVNTFGS
YECKCPGGYVLREDRRMCRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDGE
GCIDENECQTKPGLCENGRCVNTVGSYRCECNEGFTVSDTQDECLDNREGYCFTEVLQSM
CQIGSSNRNAVTKSECCCDGGRGWGQNCEVCPFPGTVAFKKLCPHGRGYTSSGADIDECK
VIHDVCRNGECINERGTYHCLCNLGYTTDVTGTLCVDLNECNESPKPCNFICKNTEGSYQ
CSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNE
CATEISLCGAKGICQNTPGSFVCECQRGFSLDQTGQSCEDVDECDGNHRCQHGCQNIIGG
YRCSCPQGYLQHYQWNQCVDENECLSAHICGGASCHNTLGSYKCMCPTGFQYEQFSGGCQ
DINECGSAQAPCSYGCSNTEGGYVCGCPPGYFRIGQGHCVSGVGLGRGQGQELSLSGEVD
DNSLSPEACYECKINGYPKRGRKRRSTNETASEAEDQQEQELPISLASWDIEKAAVFSIN
ISDLSNKDRILELLPALTTLTNHNRYLIDSGNEDGFFRINKKDGISYLHFTKKKPVPGNY
SLQISSIPLYKKKELNQLEAKHDKDYLSGELGDNLKMKIQILLH
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggggcggctgctggggatcgccctgggagttgccgtgctgtgggcgtcccag
gctggtgccgccgccgccgggcacaccgagggggtgagcgccaaggagagccggtccagc
cgggccaagaggcgagggcacggcggcgggcacgacgcgctcaaaggaccaaatgtgtgt
ggatcacgttacaatgcctactgctgccctggatggaaaacgttacctggtggaaaccaa
tgcatagtcccaatctgcagacattcctgtggggatggattttgctctagaccaaacatg
tgcacatgcccaaatggtcagatagccccctcctgtggttcaaaatcaatccaacactgt
aacatccggtgcatgaatggaggcagctgcagtgatgaccattgcctctgtcagaaggga
tatacaggaactcactgtggacagcctgtctgtgaaaatggatgtctaaacggagggaga
tgcgtagctccgaaccgctgtgcttgcacgtatggctttactggaccccagtgtgagaga
gattacaggaccggcccttgcttcactttggtaaccaaccagatgtgccagggccagctc
agtggaattgtctgcacaaaaaccctgtgctgtgcgactgtcgggagagcgtggggccat
ccctgtgaaatgtgtcctgcccagccgcatccctgccgccgaggcttcattccaaacatt
cgaacgggggcctgtcaagatgtggatgaatgccaagccatccctgggatctgtcaaggg
ggaaattgcattaatactgttggatcttttgagtgcaaatgcccagctggacacaagttt
aatgaagtaacacaaaaatgtgatgatattgatgaatgtagcaccattcctggaatttgt
gatggaggagaatgttcaaacacagttagcagttacttctgcaagtgtcctccagggttt
tatacagctcctgatggcttaaaatgcatagacgtgcgccctggattctgctactccacg
ctgagcaacgggcgctgtggcagccagctgccgcagcccctgtccaagatgcagtgctgc
tgtgacagtggccgctgctggtcatctgcccccgccaccgctccggaaatgtgccccatc
agatccactgatgagtatcgtaaattgtgcacagtagctgctatgctgccagcaagacct
gaccttcctccggcccgtcctgacatcatccctccaccactcattcctgatgtttaccct
cctccacatccagaaatcatctatccatctcgggctccaccagtccatccgatcttgccg
gtgaacttaactgactattgccaaacattccgacatctctgccgaaatgggcgttgtatt
cccactcctgggagctaccgctgcgagtgcaacaaaggattccaactgcatggtagagag
gaatgccttgatattgatgaatgtgaaaggaatccatgcattggtggagactgtgtgaac
acacaaggatcctacatctgccagtgtcgcgttgggtatcagagcacggccaccaggaca
gagtgccgagacatcgatgaatgcttacagaatggtcgtatctgtaataatggacgatgc
ataaatacagatggcagttttcactgtgtgtgtaatgctggctttcaagtggcagttgat
gggaaaaactgtgaagatatggatgagtgcagcatcaggaacatttgcctcaatgggatg
tgcatcaacgaagatggcagttttaaatgcatttgtaaaccagggttccagttagcatct
gatggacgctattgcacagacatcaatgagtgtgagacagatggaatatgcatgaacggg
cgctgtgtgaacactgatggctctttcagatgtgaatgcttccctggccttgcagtagga
ctggatggacgtgtctgtgttgatacacatatgcgaagcacatgctatggtggctacaag
agaggacaatgtgtgagaccattaacgggtgcagttacaaagtcagaatgctgctgtgcc
agcactgactatgccttcggagagccttgccagccctgcccagcacaaaactcagctgaa
tatcaggctctgtgtagcagtggaactggcatgactgcaggaggaaatgatattaatgag
tgcttattggatcctgatctctgtccaaatggaaggtgtgagaacctgcatggaacatac
aaatgttattgtgaccctggatatgaagtggactcaactgggaaaaactgcattgatatt
gatgaatgtgcactgaacatgctgctttgtgacaatgggcaatgcagaaatacccctgga
agtttcacctgcacctgtccaaaaggatttgtatacactcctgatctaaaaacatgtgaa
gatattgatgaatgtgaatctaacccctgtgttaatggagtgtgcaaaaacacaccaggt
tcttttgtttgtgaatgttctcctgaaagtactttggacccaaccagaaccatctgcata
gaaactgtcaagggtacctgttggcagaacatagtcaatggaaggtgtgaaataaatatc
aatggagcaactctgaagtcccagtgttgttcctcactaggtgctgcttggggaagccca
tgtacaccatgtgaacgagacccaatatgtcaaaagggatattcaagaataagaggaaca
ttgtgtgaagatgttaatgaatgtgaggtgtttcctggagtctgtacaaatgggcagtgt
gtcaataccttggggtcatttgtttgccagtgccccaatgggatgactttagacgcttct
ggacggacttgtcttgacattcgcttggagagttgctacctgcagcacgaggacgaacag
tgcacgtcccagatccccgggcggcaccgcatggacgcctgctgctgctccgtgggggca
gcctggggctacgagtgcgaggagtgtcctctcaggggaactcctgagtttgaagctctt
tgcccaaggggacctgggttctctacgaagatagaaataagtgggaagcctttctctaaa
gacatcaatgaatgcaaaatgttccccagcctttgtacccatggaaaatgcagaaatacc
attggcagttttaagtgtagatgtgacagtggatttgcccttgattctgaagagagaaac
tgcacagatatcgatgaatgccgcatctctcctgatctctgtggccaaggcatctgtgtc
aatactcctggagactttgagtgtgaatgttttgaaggctatgaaagtggatttatgatg
atgaaaaactgcatggacatcgatgagtgtcagcgcaatccccttctctgccgaggtggc
acctgcatcaacacagagggaagttttcggtgtgattgccctccaggccaccagatatca
ccaaatatctctgcatgtgtagatattaacgaatgtgagctgagcagcaacctgtgccgc
aatggccgttgtgtcaacctgattggaaagtatcagtgtgcttgcaaccctggatatcag
tccacacaagacaagctatactgtatcgatattgatgagtgccaaataatgaatggtggc
tgtgaagacttctgtacaaactcagagggcagctatgaatgtagctgtaaacaaggcttt
gcactcatgccagaccacaggacatgcactgatattgatgagtgtgaagacaatcctaac
atctgtgatggaggccagtgtacaaacatcccaggagaatacaggtgtctttgctatgat
ggattcatggcatctgaagacatgaagacttgcatagatgttaatgagtgtgatctgcat
ccaaacatctgtctgagtggaacttgtgagaatacaaaaggctcgtttatctgtcactgt
gatatgggatattcaggcaagaaaggcacaactggttgcacagatatcaatgagtgtgaa
attggagcccataactgcgacagacacgccatatgtacaaacactgcaggaagcttcaaa
tgtagctgcagccctggctggattggagatggtatcaagtgcacagatctggatgagtgc
tccaatggaacccacatgtgcagcccacatgctgactgcaagaatacgatgggctcttac
cgctgcctgtgtaaagagggttacactggggatggtttcacttgtacagacctcgatgaa
tgctcagaaaacttgaatctctgtgaaaatgggcagtgcctcaatgcccccggagggtac
cgctgtgaatgtgatatgggatttttgccaagtgtagatgggaaagcatgtgaagatatt
gatgagtgctcacttcctaacatctgtgtctatggtacttgtcataacctccctggactc
ttccgatgtgagtgtgaagtgggctacgagttggacagaagtggtggtaactgcacagat
gttaatgaatgtgcagaccctacaacctgcattagtggcacgtgtatcaacactgctggt
agttacacctgtgagtgccctcctgatttcgagctgaatcccacccgcgttggatgcgtt
gatacacgatctggcaactgttacctggacatcaaaacccggggagataacggtggcacc
ttctgcagcaatgagattggagttggcgtttccaaggcctcgtgctgctgctccctgggc
aaagcctggggagttccctgtgagcactgcccgctggtgaacacaactgaatataaggtt
ctttgccctggaggggaaggatttagaccaaaccctattacagttatattagaagatatt
gatgaatgtcaagagctgcctggactttgccaaggaggaaaatgtattaatacatttggt
agcttccagtgtcagtgtccatcagggtactacttgaatgaagagactcgagtgtgtgat
gatgtgaatgagtgtgagacacctggcatttgcgggcctggcacgtgttacaatactgtt
gggaactacacctgcatctgtcctcctgattacatgcaagtcaatggaggaaacaactgc
atggatatgagaagaagtctgtgttacagaaattactatgctgacaatcaaacctgtgat
ggtgagctgctcttcaacatgaccaagaaaatgtgctgctgctcctacaacattggacgt
gcatggaacaagccttgtgagcagtgtcctatccccagcacagatgaattctccacactc
tgtggaagtcaaaggcctggcttcttcattgacatttatactggattaccagttgatatt
gatgaatgcagagagattcctggagtgtgtgaaaatgggatctgtataaacatggttggc
agcttccggtgcgagtgtcctgtgggtttcttctacaatgacaagctcctgatctgtgaa
gacattgatgaatgccagaacggaccagtttgccagcagaacgcagagtgtgtgaacaca
gctgggagctaccgctgcgactgcaaaccgggctacaggttcacatccacggggcgctgc
actgatcggaatgaatgtcaagaaattcccaatatctgcagccatgggcagtgtattgac
actgttggaagtttctactgcatttgtcacaatggattcaaaaccaatgatgacaggaca
atgtgtatagatattaatgagtgcgagagagatgcctgtggcaacggaacctgcaggaac
actattggctccttcaactgccgctgcaacctgggcttcatcctctcacacaacaatgac
tgcatagatgtggatgagtgtgcaagtggaaatggaatgctctgcagaaatggccagtgt
gtgaacaccattgggtccttccagtgtctctgcaatgatggctatgaggtggctctggat
ggaaggacttgtgttgatattaatgagtgtgcactggagcctggaaaatgctccccaggc
acatgccagaacttggatggctcattcagatgtatctgtcctcctggatacatcctgcag
aatgacaaatgtgaagacattgatgagtgtgtggaacagccagaaatttgtgccctgggc
acatgcagcaacaccccaggcagtttcaaatgtctgtgtccagaaggctttgtattgtct
tccacaggaaggcgatgccaagatctgagagtgagctactgctttaccaagtttgaagat
gggaagtgttctgtcccaaagtcccgaaaccactccaaacaagagtgttgctgtgcccta
aaggggcagggatggggagatccctgtgagctctgcccagaggaagcagatgaggcattc
agacagatttgtccatttggaattggcattcttgttggacctggtgatgcaaggctggat
gtggatgagtgccttgatcctgataactgtaaatttgggcagtgtatcaacacagatggg
tctttccgctgtgaatgtccgtatggttacatcctacaaggagcagaatgtgtggatact
gatgaatgtgctgttggaaacccatgtggaaatggaacttgcaggaatgtgataggaggc
tttgaatgcacctgtgtagaaggatttgagcctgggccaatgatgacctgtgaagatgtg
aatgagtgcattcagaaccctctgctctgcgctttccgctgcgtgaacacctttggatcc
tacgagtgcaagtgccccggggggtacgttctgcgggaggaccggaggatgtgcagagat
cagaatgagtgtgaagaaggaattcatgactgtgactcaaaacagatggaatgcaaaaac
ctaattggcacctacatgtgtatctgtgggcctggttatcagcgcagaccagatggggaa
ggctgtatagatgagaatgaatgtcagaccaagcctgggctctgtgagaacggccgttgt
gtgaacacagtggggagttacaggtgtgagtgcaacgagggattcacggtcagcgacacc
caggacgagtgccttgacaacagggaaggctactgcttcactgaagtcttacaaagtatg
tgccaaatcggatcgagcaacaggaacgctgtcaccaagtctgaatgctgctgtgacggt
ggccgaggctgggggcagaactgtgaggtctgtcccttcccaggcaccgtggccttcaag
aagctttgccctcatggccgaggatacacatccagtggagcagatattgatgagtgcaag
gttattcatgatgtctgccgcaatggggagtgcatcaatgagaggggaacttaccattgt
ctttgcaatctgggctatactacagatgtcactggcactctttgcgttgatttgaatgaa
tgcaatgagtctccaaaaccttgcaatttcatctgcaaaaacacagaggggagctaccag
tgttcatgtccaaaaggatacatcctgcaagaagatgggagaagctgcaaagatcttgat
gaatgtgcaacaaagcagcacaactgccagttcctttgtgtcaacactattgggggattc
acttgcaaatgtcctcctggattcactcagcaccatacagcctgcattgacaacaacgag
tgtgctactgagatcagtctttgtggggcaaagggcatttgccaaaacacaccaggaagt
tttgtttgtgagtgtcaacgtggcttctcacttgatcaaactgggcagagctgtgaagat
gtcgatgaatgtgatggtaaccaccggtgtcagcatggctgccaaaatataattggagga
tacaggtgcagctgcccacaaggatatctccagcattaccagtggaaccaatgtgttgat
gaaaacgaatgtctcagtgcacacatttgtggaggagcatcctgccacaatactttggga
agctataaatgtatgtgccctactggatttcagtatgagcagtttagtggaggttgccaa
gatatcaatgaatgcggttctgcacaagccccatgcagttatggttgttcaaacactgaa
ggtggctacgtctgtggatgcccacctggttacttcagaataggacaaggacactgtgtt
tctggagtggggctaggcagaggtcaaggacaagagctttcactcagtggagaagtagat
gacaactccctctctccagaagcttgttatgaatgtaaaatcaatggctatcccaagaga
ggaaggaagcgcaggagcactaatgaaactgcaagtgaagcagaggatcagcaagagcag
gagctgccaatcagtctcgccagctgggatattgagaaagcagcagtgttctccatcaac
atctcagatctcagtaacaaagatcgcatcctggaactgctccctgccctcacaacactg
acaaaccataaccgatatttaattgactccggaaatgaagatggtttctttagaatcaat
aagaaggacgggataagttaccttcatttcacaaagaagaagccagtgcctggaaattat
tcattacaaatcagtagtattccactctataaaaagaaggaacttaaccagcttgaagcg
aaacatgacaaagactacctcagtggtgagctgggagataacctgaaaatgaaaattcag
atattgcttcattaa
DBGET
integrated database retrieval system
