Pyrgilauda ruficollis (rufous-necked snowfinch): 121357189
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Entry
121357189 CDS
T07608
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04115
p53 signaling pathway
pruf04210
Apoptosis
pruf05164
Influenza A
pruf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121357189 (APAF1)
04115 p53 signaling pathway
121357189 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121357189 (APAF1)
05168 Herpes simplex virus 1 infection
121357189 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
NB-ARC
APAF1_C
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
CARD
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_HPS5
eIF2A
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
WD40_RFWD3
RMC1_N
Beta-prop_SCAP
CARD_2
WD40_like
Beta-prop_NUP159_NUP214
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_DCAF12
WDR54
Beta-prop_IP5PC_F
DUF2415
AAA_16
Dark_WHD
AAA_22
Motif
Other DBs
NCBI-GeneID:
121357189
NCBI-ProteinID:
XP_041330200
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALENDIKTSYIMDRMISDEVLTLQEEERVKQQNTRKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVARPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFRRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELCDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWVNKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CAFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSND
TFIKIWDLNEKYCRNTMIGHENSVNHCRFSPNDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFKNADEQPDDVEVLVKCCSWSRNGNMILVVAKNKLLLFDINTCGLLTQVVVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSWQAYRTSVQHCRFTPDCQTLI
SSAHDSVIQVWNWHLSECVFLRGHKEAIKDFRLLENSKILSWSFDGTVKVWNITTGNPEK
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVVHELKAHEACVRCCAFSPNN
RLLATGDDKGEIRIWDVLTGALLHFCSPVTVEEGEPTHGGWVTDLCFSPDSKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttgcttatgaatcgtcaagcactggaaaatgacatc
aagacttcctatattatggatcgtatgatttctgatgaagtactgacattacaggaggag
gagagagtgaagcaacagaatacacggaaggagcgagcagctatgctaataaacatcatt
cttacaaaagataataattcatatagatccttttataatgcactgctccatgaagggtac
agagatcttgctgcacttcttcaggatggcatccctgccgtctcctctggtaacagaaag
agttcaatggatggaatgacttcctacgtgaagaccattctctgcgaagggggcgtacca
cagagaccagttgtgtttgtcgctcgaccaaaactggtagatgctattaaaaagaaactg
tactgcttgggaagtgacccaggttgggtcaccgtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatcctcagctcctggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctgctcataaaacttcag
aatctctgcagtagattggaacatgactccactctttcacaaagaccaccacttaacatt
gaggaggctaaggatcgtcttcgtttgctaatgttacgcaaataccccaggtctcttttg
gtcctggatgacatttgggattcctgggtgttaaaagcattcgataatcaatgtcaggta
ctcatcacgagcagggacaggagtgtaacagatgctgtggctggcaataaatatgaggtt
catgtggaaagtgggctagcacatgagaagggactggagattttatccctatttgtgaat
atgaaaatatcagaacttccagaacaagctaactctcttgtaagagaatgcaaaggttct
cctcttgtgatatccttgataggtgcattactccgagacttccccagccgctgggaatat
tatctcaggcagctgcagaataagcagtttagaagaataagaaaatcttcctcctatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcagctggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactgcaggaatttgttaac
aaatcactgttgttctgtgatcgcaatgggaagtcattccattattacttacatgatctt
cagcttgactttctcacagagaagaaccgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgc
atgtactggtataactttttggcatatcacatggcaggtgccaaaatgcagcaggagctc
tgtgatcttatgttttctttagattggattaaagctaaaacagaattggtggggcctgct
catctaattcatgaatatgtagaatatagttcagttctggatcaaaaggatagcacagtg
cgtgagaatttccaggagtttctgtccttaaatgggcacctgcttggacggcagccgttt
cctgacatcattcagctgggtctctgccagccagagacatcagaggtgtaccaacaggcc
aagctgcatgctcaaagggaaacaggaacattttatttggagtgggtaaataaaaaatcc
ttgaaaaatctctaccgtctggttgttcgtccgcatagagatgcagtttaccatgcctgc
ttttctaaggatagacaacgaatagcatcatgtggagctgacaaaactcttcaggtgttt
aaagcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgt
tgcgctttttctgcagatggggaattcgtagcaacttgttcaagtgataaaaaagtcaag
gtctggaattcaagaacaggccagtgtaggtgtgtgtatgaagagcactccgagcaggtc
aattgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctcaaatgac
actttcatcaaaatttgggatttgaatgaaaaatactgtagaaatacgatgataggtcat
gaaaattctgtcaatcactgcagattttcaccaaatgatgagtatgttgctagctgttcg
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttctttaaaaatgcagatgaacaaccagatgatgtggaggttttagtaaaa
tgttgctcttggtccagaaatggtaacatgattttggtggtagccaaaaataaacttttg
ctttttgacatcaacacctgtggtttgttaactcaagtcgttgtcagtcaccacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagctatggaatattaagtccttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcgccagatggatctttatttctgacttcgtctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgcaagtcctctgatgctgtgctg
aagagtgagctagatgttgtgtttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagcagcc
caagaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttggg
caggagagtggaacaataaaggtactacagttgtcagatgggaaggttctgaagtcctgg
caggcctacaggacatctgtgcagcactgtcgatttacacccgactgtcagactctcatc
tcaagtgctcatgattcagttatacaggtatggaattggcatttgagtgaatgtgtgttt
ttaagagggcacaaggaagcaatcaaggattttagacttctggaaaattcaaaaattctc
tcttggtcatttgatggaactgttaaggtttggaatattactactggaaacccagaaaaa
gattttgcttgtcatggaggtgctgttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgtt
gttcatgaactgaaagcccatgaagcctgtgtgcggtgctgtgctttctctcctaataac
agactgttggccactggagatgacaaaggagaaataaggatttgggatgttttaacaggt
gcattacttcatttctgctccccagttactgtagaggaaggagaaccaacacatggaggc
tgggtaacagacctctgcttttctcctgacagtaaaatgcttgtgtcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttttacacaaatggaaca
aacctcaagtcaatacatgtgtcccctaatttcaaagtatatgtgactgttgataatctt
ggcattctttatgtattacagaagttctga
DBGET
integrated database retrieval system
