Pyrgilauda ruficollis (rufous-necked snowfinch): 121357739
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Entry
121357739 CDS
T07608
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121357739 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121357739 (TDG)
Enzymes [BR:
pruf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
121357739 (TDG)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121357739 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
121357739
NCBI-ProteinID:
XP_041331222
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAAGAGPGHGRRRTCVIPAAAGRGRGKGTGKREEGAEARPHQGASRQAGYYAYLQQAQAF
YSFPFHQMMTAVPNTEMMTEQPTLEGIPEPNIAQEPPKEVKKGGRKRKAKETEPKQPKKP
AAKKEKPAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINP
GLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSK
DLSSKEFREGGRILMQKLQKYKPRIAAFNGKCENFYMNFFLPVAFFFHLPYIFILGIYEI
FSKEVFGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRD
QLKGIAPNTEVQEVQYTFDLQLAQEDAKKTAVKEEKYDPGYEAAYGGAYCDRAPYDTDQC
GLSSNGTAESNPQYCEGSSFSEVPNGQWMTQSFADQIPEFSAAMTQEEEGSSM
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggggcgggccctgggcacggacggcgccggacatgcgtcatccccgccgcc
gccgggagggggagggggaagggaacagggaagagggaagagggtgcggaggcccgccct
caccagggagcatcgcgccaggcgggatactacgcatatcttcagcaagctcaagcgttt
tactcatttccgttccatcagatgatgactgcagtgcccaacacagaaatgatgactgag
cagccgactctagagggcattccagagccaaacattgctcaggagcctccaaaagaagtt
aaaaaagggggaaggaaaagaaaagccaaagaaactgagccaaagcaacccaaaaagcct
gctgctaaaaaagaaaaaccagccaagtcaaaaggcaaacaagaaaagatcacagatact
tttaaagtcaaaagaaaagtggaccgttttaatggtgtatctgaagctgaacttctgacc
aagactttgcctgatattttgacctttgatttggacattgtgataattggcataaatcct
ggcctgatggcagcttacaagggacatcattacccaggacctggaaaccatttttggaag
tgtctgttcatgtctggtctaagtaatgagcagttgaaccacatggatgaccacaccttg
ccgcataaatatgggattggatttacaaacatggttgaaaggacaacacctggaagcaaa
gacctctccagcaaagagtttcgggaaggagggcgaattctgatgcagaagctacaaaag
tataaacctcgtatagcagcttttaatggaaaatgtgagaacttttacatgaattttttt
ctgccagtagctttttttttccacttaccctatattttcattttaggtatttacgaaatt
tttagtaaagaagtttttggaattaaagttaagaacttggaatttgggctgcagccacac
aaagtgccagatacagaaactctctgctatgttatgccatcatccagtgcaagatgtgct
cagtttcctcgggcacaagataaagttcattattacattaagctgaaagacttaagggat
caactgaagggcattgcacccaacacggaggtccaggaggtgcagtacacatttgacttg
caacttgcacaagaggatgctaaaaagacggctgtcaaagaagaaaagtatgacccaggc
tatgaagcagcgtatggaggagcttactgtgaccgtgcaccgtatgacacggaccagtgc
ggcttgtcttcaaatggaactgcagaaagcaatccacagtactgcgaagggtcgtccttc
agtgaggttcctaacggacagtggatgacacagtcctttgcagaccagattccagagttc
agtgctgccatgacacaggaagaggagggaagcagcatgtag
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integrated database retrieval system
