Pyrgilauda ruficollis (rufous-necked snowfinch): 121359301
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Entry
121359301 CDS
T07608
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pruf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121359301 (DSE)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
121359301 (DSE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
121359301
NCBI-ProteinID:
XP_041334099
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MRTHTRGAPSVFFIHAVCFAFACGAREDLHTMVPFVNANYDSYPMLYFSKGDVETLRLQA
STTHQHIAARLIEAVQTMLSNPLEYLPPWDPKEFSARWNEIYGNNLGALAMFCVLFPENM
EAINMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYSYLSKIQQERFLEV
IANASGYMYETSYRRGWGFQYLHNHQPTNCVALLAGSLVLMNQGYLQEAYLWTKQVLAIM
EKSVVLLQEVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFSHPWLKQHFAFMYRT
VLPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLAEQIRRNRVVEGPGTPSK
GQRWCTLHTEFLWYDASLRSVPPPDYGVPKLHYFEDWGVVTYGSALPAEINRPFLSFKSG
KLGGRAIYDIVHKNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF
NNVLMFSPAVSKSCFSPWEGQITEDCSSKWLKYKHDLAGDCQGRVVAAMERSGVVFIRGE
GVGAYNPKLKLRKLQRNLILLHPQLLLLVDQIHLEDDSPLEAATSFFHNVDVPFEETVVD
DVHGAFIRHRDGIYKMYWMDDTGHSEKATIASRMYPRGYPYNGTNYVNVTTLLRHPVTRA
IYLFIGPSVDVQSFTVRGDSPQLDVFVTTGEHAYAVYLWPVEDGSRSAFAQVIADRQKIV
FDRASAIRSSTVPEVKDYVGIVERNLQHFKPVFQQLEKQILSRVRNTASFRKTAERLLRF
SDKRQTEEAIDRIFAISQRQQQQQRGRAKKNRKVAKGYKFVDAVPDIFAQIEVNERKVRQ
KAQTQAQKELPVDEDEEMKDLLDFADITYVKHKTGASIKGRSGLAQMVATARSAPSISAS
YTRLFLILNIAIFFVMLAMQLTYFQKAKRLHGQRCLYAILLVDSCILLWLYSSCSQSQC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcacacacggggagccccaagtgtgtttttcatacacgcggtttgctttgcc
tttgcctgcggcgccagggaggacctacacacgatggttccttttgtcaatgccaactat
gacagctaccccatgctctacttctccaagggggacgtggagactctgcggctccaggcc
agcaccacgcaccagcacatcgcggctcgtctgattgaagcagtgcaaaccatgctgtcg
aatcccctggagtaccttcctccctgggacccaaaggagttcagcgctcgctggaatgaa
atttatggcaacaacctcggggccctggcaatgttctgtgtgctcttccctgaaaacatg
gaggccatcaatatggccaaggattacatggagaggatggcggctcagcctagttggctg
gtaaaagatgccccctgggatgaagtccctcttgctcactccttggttggttttgccact
gcttatgacttcttgtacagctaccttagcaagattcagcaggagagatttcttgaagta
attgccaatgcctcgggatacatgtacgaaacatcatacagacgtggatggggcttccag
taccttcacaaccaccagcctaccaactgtgtggccctgctggctggaagcctggttctg
atgaatcaaggctaccttcaggaagcatacttgtggaccaagcaagtgctggcaatcatg
gagaagtcagtagtcctgctgcaggaggtcacagatggctccctctatgaaggggtggct
tatggcagctacacaaccagatcactgtttcagtacatgtttcttgtccaaaggcatttt
gacatcaatcacttcagccacccctggctcaagcagcacttcgcatttatgtacaggact
gtcctgccagggttccagagaactgtagccatcgcagattccaactataactggttctac
gggccggagagccagctggtgtttctcgacaagtttgtcatgcgcaacggcagtgggaac
tggttggcagagcagatcagaaggaaccgagtggtggagggcccgggcacaccgtccaaa
gggcagaggtggtgcactctccacactgaatttctctggtatgatgcaagtttgcgctct
gtacctccaccagactatggggttcctaagctgcattattttgaggactggggagtggtg
acttatggaagtgctttgccagcggaaatcaacaggcctttcctttccttcaagtcagga
aagctgggaggacgtgcaatatatgatattgttcataagaacaagtacaaagagtggatc
aaggggtggaggaactttaatgctggccacgaacacccagaccagaactccttcactttc
gctcccaatggcgtacctttcataacagaagctctgtatgggccaaaatatacttttttt
aataatgtgttgatgttctcccctgctgtgtctaagagctgcttctccccatgggaaggg
cagattacagaagactgttcctcaaagtggcttaaatataaacatgacttggctggcgac
tgtcagggacgagtggttgccgccatggagagaagcggggtggtttttatcaggggagaa
ggagtgggtgcatacaatcctaaactgaagctgagaaaattgcaacgaaaccttatactt
ctccatccccagcttctcttgctagtggaccaaatccacctagaagatgacagccctctg
gaggcagcgaccagtttcttccacaatgtggatgtaccttttgaagaaacagttgttgat
gatgtccatggagccttcattaggcaccgtgatgggatatataagatgtactggatggac
gacactggccacagtgagaaagccaccattgcctcaaggatgtatccccggggctacccc
tacaatggaacaaactacgtgaatgtaacgaccctgctgcggcaccccgtcacgagggcc
atctaccttttcattgggccctctgtggacgtgcagagcttcaccgtgcgtggagattcc
ccacagctggatgtttttgtcaccactggtgagcacgcctatgccgtgtacctgtggccc
gtcgaggatggctcccgctctgcctttgcacaggttattgcagaccgccagaaaattgtc
tttgaccgagcctctgccattaggagctccacagtgccagaagtgaaggactacgtaggg
atcgtggagaggaacctgcaacattttaagcctgttttccagcagcttgagaagcagatc
ctgtctcgtgtacgcaacacggccagctttaggaagactgccgagcgcctgctgaggttt
tcagataagagacagacagaggaggccattgacaggatatttgcaatctctcagaggcag
cagcagcagcagcgtggcagagcaaagaaaaacaggaaggtagccaaaggctacaaattt
gttgatgccgttcccgacatttttgcacagattgaggtaaatgaaagaaaagtgcgacaa
aaggcacagactcaagcacaaaaagagttgcctgtagacgaagatgaggaaatgaaagat
cttctggactttgcagatatcacttatgtgaaacacaaaactggcgcgtcaatcaaaggc
cgatcggggctggcacagatggtggcaactgctcgaagtgccccgtcaatatcagcttct
tatactcgcctctttctaattctcaacattgctattttttttgtcatgctagcaatgcag
ctcacgtatttccagaaggccaagagactgcatggccaaagatgtctgtatgcaatactt
ttagtagacagctgtatattattgtggctgtattcttcctgttctcagtcacaatgttag
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