Pyrgilauda ruficollis (rufous-necked snowfinch): 121359874
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Entry
121359874 CDS
T07608
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121359874 (KDM1A)
Enzymes [BR:
pruf01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
121359874 (KDM1A)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121359874 (KDM1A)
REST complex
121359874 (KDM1A)
Histone demethylases
121359874 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_oxidored
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
MurD-like_N
GIDA
Lycopene_cycl
IlvN
Motif
Other DBs
NCBI-GeneID:
121359874
NCBI-ProteinID:
XP_041335072
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MAGSDRTPRKKEPPRASPPGGVSEASAVGAAPAPGAETTGIAETPEGRRTSRRKRAKVEY
REMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQD
DSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQL
WLDNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGK
VIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGN
PMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNV
LNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQ
QYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVY
LSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAE
GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFV
PPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKA
PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGS
YSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLR
EAGRIADQFLGAMYTLPRQPTPGVPPQQAASM
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggccgggagcgatcgcacgccccgcaagaaggagccgccgcgggcctcgccgcccggc
ggtgtgtccgaggcctcggccgtcggggccgcccctgcgcccggcgccgaaaccaccggc
atcgccgagacccctgagggccgcaggaccagccgccgcaagcgagccaaagtcgagtat
agagagatggatgagagtcttgcaaacctgtcagaagatgagtattactctgaagaagag
agaaatgctaaagctgagaaagagaagaaactacccccaccacctccaccagctcctgca
gaagaagagaatgaaagtgagccagaggagccgtctgggcaagcaggaggacttcaagac
gacagttctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccag
agtagacttccacatgaccgtatgacatctcaagaagctgcctgcttccctgatataatc
agtgggccccagcagactcagaaggtgtttctgtacatcaggaaccgcaccctgcagctc
tggttggataacccaaagattcagctgacatttgaagcaactatccaacaattagaagca
ccttataatagtgacacagtgctcgttcacagggttcacagctacctggagcgtcatggg
ctgatcaactttggcatctacaaaagagtgaaaccccttccaaccaagaagacaggaaag
gtgatcattattggttctggagtctctgggttggcagcagctcgccagttgcagagtttt
ggaatggatgtcacagttctggaagccagagaccgagtaggaggaagagttgctaccttt
cgcaaagggaattatgttgctgatctaggagcaatggtggtgacaggacttggaggaaat
cccatggctgtggtcagcaaacaagtaaatatggaattggcaaagatcaaacaaaaatgt
ccactttatgaagcaaatggacaagctgttcccaaagagaaagatgaaatggtggagcaa
gaatttaatcgtctgctggaagccacatcctatctcagtcatcagctggattttaatgtt
ctcaataataagcctgtctccctaggtcaggctctggaggttgtcatacaattgcaggag
aagcatgtgaaggatgagcagattgagcactggaaaaaaattgtgaaaacacaggaggaa
ttgaaagatcttcttaacaagatggtgaatttaaaagagaagattaaagaacttcatcag
cagtataaggaggcatcagaagtgaagccacctcgggatatcacagcagagttccttgtg
aaaagcaagcacagagatctgactgcactttgcaaggagtatgatgaattggcagaaaca
caaggaaagctggaagagaaattacaagaacttgaagccaatccaccaagtgatgtttat
ttgtcatcaagagacaggcaaatacttgactggcattttgcaaacctagaatttgctaat
gctacacccctttctacactctcactgaagcactgggaccaggatgatgactttgagttc
acaggcagtcacttgactgtgaggaatggctattcctgtgtgccagtagccctggcagaa
gggttggacattaaattgaacacggcagttcgacaggttcgctacactgcatcaggctgt
gaagtgatagctgtaaatacccgatctaccagccagaccttcatttataagtgtgatgct
gtgctgtgcactctgcccctgggagtgctgaaacagcagcccccagcagttcagtttgtg
ccacctcttcctgagtggaaaacttctgcagtgcagaggatggggtttggcaacctgaac
aaggttgtgttgtgttttgatcgtgtcttctgggatcccagtgtcaatttgtttggccat
gttgggagcactactgcaagcagaggagaacttttcctcttttggaacctgtacaaagca
ccgattttgttggccttggtggcaggagaagcagcagggatcatggagaacatcagtgac
gatgtcattgtgggtcggtgcctcgccatcctcaaaggcatcttcggcagcagcgccgtg
ccccagcccaaagagactgtggtgtcccgctggcgtgctgacccgtgggcccggggatca
tactcctatgtagctgctggatcctctggaaatgactatgatttgatggctcagccaatt
actccaggaccagccattccaggtgctccacagcccatccctcgtttgttcttcgcgggc
gagcacaccatccgcaactacccggccacggtgcacggcgcgctgctgagcgggctgcgc
gaggccggccgcatcgccgaccagttcctgggggccatgtacaccctgccccggcagccc
acgcccggcgtgcccccccagcaggctgccagcatgtga
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