Pyrgilauda ruficollis (rufous-necked snowfinch): 121362106
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Entry
121362106 CDS
T07608
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04514
Cell adhesion molecules
pruf04520
Adherens junction
pruf04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pruf01009
]
121362106 (PTPRF)
Enzymes [BR:
pruf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121362106 (PTPRF)
Protein phosphatases and associated proteins [BR:
pruf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121362106 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
V-set
C2-set_2
PTPlike_phytase
Fn3_VIN3
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
121362106
NCBI-ProteinID:
XP_041339278
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHE
VMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYTCVAIS
SLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSLEGQ
FQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQA
RMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITK
YELLYWEGEDGTQEKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTVEARTAQ
STPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQETVIGGLLPETT
YSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPPKEMVGELLG
YRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEEFEKEITTAE
DVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQDLANITKDTS
ITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKNFRVNAVMKTSVLLSW
EVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSSAGGLQHLVS
IRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVVPADQSTSTLTARWRT
PDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKNYKGFYNKPL
SQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMGPVLAVILII
IIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGASVPCCPNIS
SMRDHPPIPVTDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANV
IAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTA
TIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVVLLDTVELATYTVRTFALYKNGSNEKT
ELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCSAGVGRTGCFIVIDAM
LERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHI
QKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQ
PIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHDSTIVVMLTKLREM
GREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWP
EQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGV
VDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactgactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaggctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
tttgatgatggatccggatcagttctgcggatacagcccctgcgtgtccaccgagatgag
gctatctatgagtgcacagccaccaatagtgtgggggagataaacaccagtgccaagtta
acagtgttagaagaagaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtggtaaccct
gatcccgaaatctcctggttcaaggacttcctgcccgtcgacactgccaccagcaatggg
agaatcaagcaactccgctcgggagctctgcaaatagagaacagtgaggagtcagaccaa
ggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgctactctgccccagccaac
ctttatgttcgagtgcggcgtgttgctcctcgattctctatccctccgagcaaccacgag
gtgatgcctggggggagcgtgaacctcacgtgcgtggcagtaggtgctccaatgccgtat
gtgaagtggatggctggtgtggaggagctgaccaaagaagatgagatgcccgtcggtagg
aatgtcctggagctgaataacatcatgcagtctgccaactacacctgtgtggccatctct
tcccttggcatgattgaagccacagcccagatcactgtcaaagcattgccaaaacctcca
acagagccattagtgactgaaacaacagctaccagcgtgaccctcacctgggattcaggc
aactctgaccccatttcatattacgtcatccagtacaagcccaaatccctggagggccag
ttccaggaggtggatggtgtggcaacaacccgctatagcataggtgggctcagccccttc
tcagagtacgagttccgggtcatcgcagtcaacaacatcggcaggggtccccccagtgag
ctggtcgaggcccggacaggagagcaagctccttcaagtccacccctcaaagtccaggca
cggatgctgagtgccagcaccatgctggtccagtgggagcagccagaggagcccaatgga
cagatccgagggtaccgcgtgtactacaccaccgacccgcacctacctttgagcatgtgg
cagaagcacaacactgacgacagccacctcaccaccgtgggcagcctcatcacaggcacc
acctacagcatccgcgtcctggccttcacttcggtgggcgacgggcccccctcggacatc
atccaggtcaaaacacagcaaggggttcctgcccagccagctgacttccaggcagaagca
gagtctgatacccgcatcctgttgacatggctgcctgcctctcaggaacgcattactaaa
tatgagctgctgtactgggaaggggaggatggcactcaggaaaaggtggagtttgaccca
acctcctcatatgctgtggaaggtctcaaaccagacacattgtataagttccgtctgggc
gcccgctcagagctgggggtgggagtttacacccccaccgttgaagccagaactgctcaa
tccaccccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccaccaccatc
cgggtaagttgggtgccaccgcccgcccagagccgcaatggggtcatcacccagtactcc
attgcctaccaggcagtggaaggagatgacaacaccaagcatgtggtggatggcattgga
cgggagcattccagctgggagatcaaggacctggagaaatggacagaatacaaggtgtgg
gtaagggctcacaccgatgtggggccaggaccggagagcatccccgtgcacgtacgcact
gacgaggatgtgcccagtgccccaccgcgaaaggtggaggtggagtctgtgaactcgact
gccatccgggtgagctggaagctgcccatctccaacaagcagcacgggcagatccgtgga
tatcaggttacctatgtgaagctggaaaacaacgagccccgagggcagccagtgatcaag
gacgtcatgctgtcagaggcacaggagacagtcattggaggcctgctgccagaaaccacc
tactctgtcacagttgctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaa
gtcatcaccaccacaggggcagtcccggggaagcccaccatgatgattagcacgacagcc
atgaacacagccctcatccagtggcacccacccaaggagatggtaggggagctgctgggt
taccgactgcagtacagacgtctggatgaggaaaaaatgaacaccatagacttcgggaag
agagaccatcactacacagtgaccaacctgcacaagggggccacgtacctcttcaaattg
tctgccaagaacagagctggcccaggagaggagtttgagaaggagatcacaactgctgaa
gatgtgccaagcggcttcccacagaacctgcgtgtggtgggtctcaccacttccaccaca
gaagttgcttgggaccccccagtcttggcagaaagaaacggcaagattgtcaactacaca
gtggtatacagggacataaatagccagcaggacctggctaacatcaccaaggacacgagt
atcactttgacaaatttgaaacctgataccacttacgacatcaaagtgagggcccgcacc
aataagggggctgggccactcagccccagcatccagtcccggaccatgcctgtagagcaa
gtgtttgctaagaacttccgtgtcaatgccgtcatgaaaacatctgtgttgctgagctgg
gaagtgcctgactcctataaatctgcagtgccttttaagattctgtacaatagccagagt
gtggaggtggacggccactcgatgaagaagctcataagtgacctccaaccagacacggac
tattcttttgtgctgatgaaccgtgggagcagtgcaggggggctccagcacctcgtctca
atccgcaccgctcctgatgtcttgcaaagcaaacccatcgccacaaacaagtacatacag
gaaggaaaattcacactaactcttcccaaagtgcagaccactgtgccagttcggtggtac
tacatcgtggttgtgccagcagaccagagcaccagcaccctgactgctcggtggcggaca
cctgatgagatggagctggaccagctgctggaggccataagccaggggagtcagagcagg
cggcagcgacgccaggcagacaggctcaagccctacattgctgctcaagtggatgtgctg
cctgagaccttcaccctgggggatgagaagaactacaaaggtttctacaacaagcctctg
tctcaagacctgagctatcgctgcttcgtgctggcctcgctggaggacggggacacgaag
agatatgcagccagcccctactcggatgagatcgtgatggaagtggcatcagcgaagcag
caggatgagccagagatgctgtgggtgatgggacccgtcctggctgtgatattaatcatc
atcattgtcattgccatacttctcttcaaaaggaaaagggcacattccccctcttccaag
gatgagcactccatcggcctgaaggactcactcttggcccactcatctgacccagttgag
atgaggcggctcaactaccagactccaggtgccagtgtcccctgttgcccgaatatctca
agcatgcgtgaccacccccccatccccgtgaccgacctcgctgacaacatcgagcggctc
aaggccaacgatgggctgaagttctcccaggagtacgagtccattgatcctgggcagcag
ttcacctgggagaactccaacctggaagtgaataaaccgaaaaaccgctatgcaaatgtg
atagcctatgaccactcacgtgtcatcctgacttccattgatggggtcccaggcagtgat
tacatcaatgccaattacattgatggctatcggaagcagaacgcctacatcgccacgcag
ggaccgctgccggaaaccctcagcgacttctggaggatggtgtgggaacagagaacagca
actatagtcatgatgaccaggctggaggagaagtccagggtaaagtgtgaccagtactgg
ccgagccggggcacagaaacctatgggatgatccaggtggtcctgctggatacagtcgag
ctggcaacctacaccgtccgcacctttgcgctgtacaagaatggctccaatgagaagaca
gagctgcgacagttccagttcatggcttggcccgatcacggggtcccagaataccccacc
ccaatcctcgctttcctgcgacgggtcaaggcctgtaacccaacagatgctgggcccatg
gttgtgcattgcagtgctggtgtgggccgaaccggctgcttcattgtcatcgacgccatg
ctggagcggatgaagcacgagaagaccgtggacatctacggccacgtgacgtgcatgcgc
tcccagcgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttg
ctggaggccgccacgtgcggcaacaccgaggtgcccgcgcgcaacctcttcgcccacatc
cagaagctgacgcaggtgccaccgggcgagagcgtcactgcaatggagctggaattcaag
ctgctggccaattctaaagcacatacctcacgtttcatcagtgccaacctcccgtgcaac
aagttcaagaaccgcctcgtgaacatcatgccgtacgagctgacaagagtctgcctgcag
cccatccgcggtgtcgagggctctgactacatcaatgccagcttcatagatggctacagg
cagcagaaggcctacatcgccacgcagggaccactggctgagaccacagaggatttctgg
cggatgctctgggagcacgactccaccattgtggtgatgttgacaaagctgcgtgagatg
ggccgggagaagtgccatcagtactggcctgcagagcgctctgcccggtaccagtacttc
gtggtggaccccatggcagagtacaacatgccacagtacatcctccgagagttcaaggtg
acggatgccagggatggccagtcacggaccatccgccagttccagttcacagactggcct
gaacagggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcacaag
accaaggagcagttcgggcaggatgggcccatcacagtgcactgcagcgctggggttggg
cgcaccggtgtgttcatcacactcagcattgtgctggagaggatgcgctacgagggcgtg
gtggacatgttccagatggtgaagaccttgcgaacgcagcggccggccatggtgcagaca
gaggaccaataccagctgtgctacagagccgcactggagtaccttggcagcttcgaccac
tatgcaacgtaa
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integrated database retrieval system
