Pyrgilauda ruficollis (rufous-necked snowfinch): 121362313
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Entry
121362313 CDS
T07608
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1F-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04010
MAPK signaling pathway
pruf04020
Calcium signaling pathway
pruf04260
Cardiac muscle contraction
pruf04261
Adrenergic signaling in cardiomyocytes
pruf04270
Vascular smooth muscle contraction
pruf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121362313
04020 Calcium signaling pathway
121362313
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121362313
09153 Circulatory system
04260 Cardiac muscle contraction
121362313
04261 Adrenergic signaling in cardiomyocytes
121362313
04270 Vascular smooth muscle contraction
121362313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121362313
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121362313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
121362313
NCBI-ProteinID:
XP_041339644
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
PPKDLSPLAEAMGQPLGWGSSDGPGGAAGGGTPPGQRQRRPPHPKHKGQGGTGGVHRSPR
ALFCLRLNNPIRRAAISIVEWKKGDTEQVEYVFLIIFTVETFLKIIAYGLVLHPSAYIRN
GWNLLDFVIVIVGLFSVILEQVSHKPGDAHHMSGKPGGFDVKALRAFRVLRPLRLVSGVP
SLHIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFFIGSDLESEDDPS
PCAFSGHGRACLQNNTECRGRWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQD
AMGHELPWIYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDL
RGYMDWITQAELEGDEEEGEHEKHRLTAEDLMGKRKPRLKWLRHASHSTDTHASLPGSET
TSVNTETVGEEEAPPTACDRCLGKITKTKFCRRLRRLNRLWRRRCRAAVKSVSFYWTVLL
LVFLNTLTIASEHHGQPPWLTETQAYANKALLSLFAAEMVLKLYALGPSCYFASFFNRFD
CFVVCGGVLETALVERGAMEPLGISVLRCVRLLRVFKVTRHWASLSNLVGSLLNSMKSIA
SLLLLLFLFIIIFALLGMQLFGGRFSFDETQTKRSTFDTFPQALLTVFQILTGEDWNAVM
YDGIMAYGGPVFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLADGDNINSGGDKKDKA
GEAEAGTESQDVAVKVEGDQPQEEEEEEEEEVEEGDEEAGGERDSLGRAQLESLEEAPKT
KVTPIPEGSAFFVLSSTNPLRVKCHALINHHIFTNLILVFIILSSISLAAEDPVRAHSPR
NHILGYFDYAFTSIFTVEILLKGKFYSCTDEAKHTPGECKGTFLVYKDGDVSHPSVRERL
WLNSDFNFDNVLAGMMALFTVSTFEGWPALLYKAIDANAENQGPIYNYRVEISIFFIVYI
IVIAFFMMNIFVGFVIITFRAQGESEYRNCELDKNQRQCVVYALKAQPLRRYIPKNRTQY
RVWAMVNSTAFEYIMFVLILLNTIALAVQHYEQSKPFNYVMDLLNMVFTGLFTVEMVLKI
IAFKPRVCRRGVMGGSHKGDTRGGHRQGVLTTSPPPQHYFCDAWNTFDALIVVGSVVDIA
VTEVNSSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSFQALPYVALLIAMI
FFIYAVIGMQTFGKVALQDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKR
CDPESDAGPGEEFTCGSNFAIAYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPH
HLDEFKRVWSEYDPAAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNS
DGTVTFNATLFALVRTSLKIKTEGNLDVANKELRAVVKKIWKRTKPKLLDEVIPPPEEEE
VTVGKFYATFLIQDYFRKFRRRKERGMLGANAGPSNECALQAGLQTLQALGPEMRRALSD
LEGDEGGDAPSEEPLTYAAPETLYGSAPGSPLLSEPPPVPSPAPTEGEDPAPPSHGGAPR
PGGRRRSDAGDQEEEAPAEDAEEPGGEPGDVSHDEDLESSAPARRRWVGDRAPGPPRWAA
ELPRGGSLPLPPRHFAFGSGAREGQQLKRRRLLPPTPAGRKPSFTIQCLRRQGSCEDEPI
PGTYNPSGPPGPARPQGYGSSETWRLGGSSQAWAAPARGHVLYAPLILVEGAPAAGAGGS
LPPLNRWFPPAPLRLRPCGPHDALARGSADSLVEAVLISEGLGLFARDPKFVAVAKREIA
DACDMTMDEMESAATDLLTRRRAPPAPTPAVYSDEEPLRPPAEEELADEMGWAGGV
NT seq
5573 nt
NT seq
+upstream
nt +downstream
nt
ggcccccgaaggacctgtcccccttggccgaggccatggggcagcccctgggctgggggt
ccagcgacggccccgggggggctgcgggcggggggacccctccggggcagcggcagcgcc
gccccccccaccccaagcacaagggccaggggggcaccgggggcgtccatcgctcccccc
gcgccctcttctgcctccgcctcaacaaccccatccgccgggcggccatcagcatcgtgg
agtggaagaaaggggacactgagcaggtggagtacgtgttcctcatcatcttcacggtgg
agacgttcctgaagatcatcgcctacgggctggtgctgcaccccagcgcctacatccgca
acggctggaacctgctggacttcgtcatcgtcatcgtggggctgttcagcgtgatcctgg
agcaggtgtcccacaagccgggcgatgcccaccacatgagcggcaagccgggcggcttcg
acgtcaaggccctgcgcgccttccgcgtgctgcgcccgctgcgcctcgtctccggcgtcc
ccagcctccacatcgtgctcaactccatcatgaaggcgatggtgccgctgctgcacatcg
cgctgctcgtgctcttcgtcatcatcatctacgccatcatcggcctcgagctcttcatcg
gccgcatgcacaagacctgcttcttcatcggctctgacctggagtcggaggatgacccct
ctccctgcgccttctcggggcacggccgcgcctgcctgcagaacaacaccgagtgccgcg
gccgctgggaggggcccaacggcggcatcaccaacttcgacaacttcttcttcgccatgc
tcaccgtgttccagtgcatcaccatggagggctggaccgacgtgctctactggatgcagg
acgccatgggccacgagctgccctggatttacttcgtcagcctcgtcatcttcggctcct
tcttcgtcctcaacctggtgctgggggtgctgagcggggaattctccaaggagagagaga
aggccaaggcccgcggggacttccagaagctgcgggagaagcagcagctggaggaggatc
tgcggggctacatggactggatcacccaggccgagctggagggtgacgaggaggaggggg
agcatgagaagcaccgtctgaccgccgaggacctgatggggaagcggaagccacggctga
agtggctgcgccatgcgagtcactccactgacacccacgccagcctcccgggcagcgaga
ccacctcggtgaacacggagaccgtgggggaggaggaggcgccgccgaccgcctgcgacc
gctgcctgggcaaaattacaaagacaaaattctgtcgccgcctgcgccgcctgaaccgcc
tgtggcgccggcgctgccgcgcggccgtgaaatccgtgtccttctactggaccgtgctgc
tgctcgtgttcctcaacacgctgaccatcgcctccgagcaccacgggcagccgccctggc
tcaccgagacacaggcgtacgccaacaaggcgctgctgtcgctgttcgccgccgagatgg
tgctgaagctctacgcgctcggcccctcgtgctacttcgccagcttcttcaaccgcttcg
actgcttcgtggtgtgcggcggcgtgctggagaccgcgctggtggagcgcggcgccatgg
agccgctcggcatctccgtgctgcgctgcgtgcgcctgctgcgcgtcttcaaggtcaccc
ggcactgggcatcactgagcaacctggtggggtccctgctgaactccatgaaatccatcg
cctccctgctgctgctgctcttcctcttcatcatcatcttcgctctcctgggcatgcagc
tcttcgggggccgcttcagcttcgacgagacccagaccaagcgcagcaccttcgacacct
tcccgcaggccctgctcaccgtgttccagatcctgacgggggaggattggaacgcggtga
tgtacgatgggatcatggcctacggtggccccgtgttccccgggatgctcgtctgtgtct
acttcatcatcctcttcatctgcgggaactacatcctcctcaacgtcttcttggccatcg
ccgtggacaacctggcggacggtgacaacatcaactcggggggggacaaaaaggacaagg
ctggggaggcagaggcggggacggagagccaggacgtggctgtgaaggttgagggggatc
agccgcaggaggaagaggaggaggaggaggaggaggtggaggaaggtgacgaggaggccg
ggggggagcgtgacagcctggggagggcccagctggagtccctggaggaggcccccaaga
ccaaggtgaccccgatccctgagggcagcgccttcttcgtgctgagcagcaccaacccgc
tgcgggtcaagtgccacgccctgatcaaccaccacatcttcaccaacctcatcctcgtct
tcatcatcctcagcagcatctccctggccgcagaggaccccgtgcgcgcccactcacccc
gcaaccacatcctgggctactttgactacgccttcacctccatcttcaccgtggagatcc
tgctcaagggcaagttctacagctgcactgacgaggccaagcacacgccaggagagtgca
aggggacattcctggtgtacaaggacggggacgtgtcccacccgtcggtgcgggagcgcc
tctggctcaacagtgacttcaacttcgacaatgtcctggcggggatgatggccctgttca
ccgtgtccaccttcgaggggtggccagcgctgctgtacaaggccatcgatgccaacgccg
agaaccaggggcccatctacaactaccgtgtggagatctccatcttcttcatcgtctaca
tcatcgtcatcgccttcttcatgatgaacatcttcgtgggcttcgtcatcatcaccttcc
gcgcgcagggcgagagcgagtaccgcaactgcgagctcgacaagaaccagcggcagtgtg
tggtgtacgcgctgaaggcgcagccgctgcgccgttacatccccaaaaaccgcacccagt
accgcgtgtgggccatggtcaactccaccgccttcgagtacatcatgttcgtcctcatcc
tgctcaacaccatcgccctggccgtgcagcactatgagcagtccaagcccttcaactacg
tgatggacctgctcaacatggtgttcacggggctcttcactgtggagatggtgctcaaga
tcattgccttcaaaccccgggtatgccgcaggggtgtcatgggggggtcacacaaggggg
acacaagggggggtcacagacagggggtcctcaccacctcccccccaccccagcattact
tctgcgatgcctggaacacctttgatgccctcatcgtggtgggcagcgtggtggacattg
ccgtcactgaggtcaacagctcagaggacagttcccgcatctccatcaccttcttccggc
tcttccgcgtgatgcggttggtgaagctgctctccaagggcgagggcatccgcaccctgc
tctggaccttcgtcaagtccttccaggccctgccctacgtcgctctgctcattgccatga
tcttcttcatctacgccgtcatcgggatgcagaccttcgggaaggtggcgctgcaggacg
ggacccagatcaaccgcaacaacaacttccagaccttcccccaggccgtgctgctgctct
tcaggtgtgccacgggggaggcgtggcaggagatcatgctggccagcctgccgggcaagc
gctgcgaccccgagtcggacgcgggcccgggggaggagttcacctgcggcagcaacttcg
ccatcgcctacttcatcagcttcttcatgctctgcgccttcctgatcatcaacctgttcg
tggctgtgatcatggacaattttgactacctgacacgcgactggtccatcctgggcccac
accacctggatgagttcaagcgtgtgtggtccgagtacgaccccgcagccaagggccgca
tcaaacacctggacgtggtgacgctgctgcgccggatccagcccccactgggctttggga
agctctgcccacaccgcgtggcctgcaagcgcctggtggccatgaacatgcccctcaact
cggacgggaccgtcaccttcaacgcaacgctcttcgctctggtccgcacctccctcaaga
tcaagacggaagggaacctggatgtggccaacaaggagcttcgggctgtggtgaagaaga
tctggaagaggacgaagccgaagctgctggacgaggtcatccccccgcccgaggaggagg
aggtcaccgtcgggaagttctacgccaccttcctgatccaggactatttccgcaagttcc
ggcggcggaaggagcgggggatgctgggcgctaacgcaggccccagcaacgagtgtgcgc
tgcaggccgggctgcagacactgcaggcgctgggccctgagatgcgccgggcactgagtg
acctggagggggacgagggcggggacgccccttcggaggagccgctcacctacgcagccc
ccgagacgctctacggctccgcccccggctcccccctgctctcggagccaccccccgtcc
ccagccccgcgcccaccgaaggggaggaccccgcgcccccctcccacgggggagcccccc
gccctggcggcaggcggcgctccgacgcgggggaccaggaggaggaagcccccgccgagg
atgcggaggagccgggaggggagccgggggatgtcagccacgacgaggacctggagagct
cggcaccggcccggcgccgctgggtcggggacagggcaccgggacccccgcgctgggcgg
cggagctgccccggggggggtcgctgccgctgcccccccggcacttcgcgtttggcagcg
gcgctcgcgaggggcagcagctgaaacggcgccggctcctgccccccacccccgctggcc
ggaagccctccttcaccatccagtgcctgcggcgccagggtagctgcgaggacgagccca
tcccgggcacttacaacccctcgggcccgcccggccctgcccggccgcagggctacggca
gctccgagacctggcgcctggggggctcctcgcaggcctgggcggccccggcccgcgggc
acgttctgtacgcgccgctcatcctggtggagggggctccggcggcgggggcgggcggca
gcctgccccccctcaaccgctggttcccccccgcgccgctgcgcctgcggccctgcgggc
cccacgatgccctggcccgaggctcggctgacagcctggtggaggccgtgctgatctcgg
aggggctggggctgttcgcccgcgaccccaagttcgtggcggtggccaagcgcgagatcg
cggacgcgtgcgacatgacgatggacgagatggagagcgcggccacagacctgctgaccc
ggcgccgcgctccgcccgcgcccactcccgccgtctacagcgacgaggaaccgctgcggc
cgccggcggaggaggagctggcggacgagatgggctgggccggcggggtctag
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