Planktothrix rubescens: PCC7821_03382
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Entry
PCC7821_03382 CDS
T09709
Symbol
yodJ
Name
(GenBank) Putative carboxypeptidase YodJ
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
prun
Planktothrix rubescens
Pathway
prun00550
Peptidoglycan biosynthesis
prun01100
Metabolic pathways
prun01502
Vancomycin resistance
prun02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PCC7821_03382 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCC7821_03382 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PCC7821_03382 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prun01002
]
PCC7821_03382 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prun01011
]
PCC7821_03382 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
prun01504
]
PCC7821_03382 (yodJ)
Enzymes [BR:
prun01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
PCC7821_03382 (yodJ)
Peptidases and inhibitors [BR:
prun01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
PCC7821_03382 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
prun01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
PCC7821_03382 (yodJ)
Antimicrobial resistance genes [BR:
prun01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
PCC7821_03382 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
CAD5964589
LinkDB
All DBs
Position
I:3623235..3624107
Genome browser
AA seq
290 aa
AA seq
DB search
MSGVKPLKNSSLPKQAQTLADGVTEDIPEAIRDIPALPVVSSGSSGKPGLFWKMLGLALV
AFCTALVMNYQFGILAPRSDIPVAQTPIPVVTPSPSASLSSTPPPTSAPTPTTTPTLPDN
LLGHLPYQEAPESELKSITADGGHRLRKAAAKAYEEMEQDARASGVSLVPISTFRSVKDQ
ETIFFEIKAQRGQVATKRAEVSAPPGYSEHHTGYAIDIGDGGRPSTDLNVSFEETPAFQW
LKDHAAFHSFELSFPKDNPQGVSYEPWHWRFVGDRDSLETFYKARNQKEN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagtcaaaccgttgaagaattctagtctgccgaaacaggcccaaaccttagcc
gatggcgtaacagaagatattccagaggcgatacgagatattcccgcgcttccggtggtt
tcctctggctcctctgggaagccggggctattctggaaaatgctggggttagccctggta
gccttctgtaccgccttagtcatgaattatcaatttggaattctggctcctcggtctgat
attcccgtagcccaaaccccaattcctgtggttacgccctcaccttctgcgtctttgtct
tcaactcccccgccaacgagtgccccaaccccaaccacaactcccacccttcccgataat
ttattgggtcatctcccctatcaagaagcaccggaatcagagttaaaaagtattacggcc
gatggggggcatcggttacgcaaagctgccgccaaagcttatgaggaaatggaacaggat
gctagagctagtggggtcagtttagttccgatttcaacctttcgcagtgttaaagaccag
gaaacgatcttttttgaaataaaagcccaacggggacaagtggcaactaaacgggcagag
gtgagtgctcctccgggttatagtgaacatcatacgggttatgccattgatattggagat
gggggcagaccttctacggatttgaatgtcagttttgaagaaaccccggcgtttcaatgg
ttaaaagatcatgccgcttttcatagttttgagttatcctttcctaaagacaatccccaa
ggagtgagttatgaaccttggcattggcgttttgtaggcgatcgcgatagtttagaaact
ttttacaaagccagaaaccaaaaggaaaattga
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