Pseudomonas rhodesiae: HRH33_05555
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Entry
HRH33_05555 CDS
T07097
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx00300
Lysine biosynthesis
prx00550
Peptidoglycan biosynthesis
prx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HRH33_05555
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HRH33_05555
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prx01011
]
HRH33_05555
Enzymes [BR:
prx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HRH33_05555
Peptidoglycan biosynthesis and degradation proteins [BR:
prx01011
]
Precursor biosynthesis
Amino acid ligase
HRH33_05555
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QKJ72049
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Position
1246001..1247464
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGGKLDGRAHIADALQRGAAAVA
YEAEGATVLPITDVPLIPVKGLAKQLSDIAGRFYGEPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVSALAFDVAVMTNLSRDHLDYHGTMEAYAAAKAKLFAWNDLKCRVVNLDDDFGRQ
LAAEDSEARLISYSLHDSSAYLYCREAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAIGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGKQPLVVVDYAHTPDALEKVLEAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSENPSQIFDDIRAGF
KDVSKATFVAGRGAAIAQLIAGASADDVVVLAGKGHEDYQEINGERHAFSDLVEADHALS
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagtttgaacaagatcttcgcccacgccggtcgcgacctattgattcgtgag
ctgactctggacagccgcaatgtacgtgccggtgacctgttcctggccgtgccgggtggc
aagcttgacggccgtgcacacattgccgatgcgttgcaacgtggtgccgccgccgtggct
tatgaagccgaaggcgccaccgtgctgccgatcaccgacgtgccgctgattccggtcaag
gggctggccaagcaactgtcggatatcgccgggcgtttttatggcgaacctagccgccac
ctcaacctagtgggcgttaccggtaccaatggcaagaccagcgtgacccaattggttgcc
caggcccttgacctgctgggccagcattgcgggattgtcggcaccctggggaccggtttc
tatggcgcgctgcaaagcggcctgcacaccaccccgaacccgattgccgtgcaagcgacc
ctggccgacctgaaaaaggccggtgccaaggccgtggccatggaagtctcgtcccacggg
ctggatcaaggccgcgtcagcgccctggcgttcgatgtggcggtgatgaccaacctgtcc
cgcgaccatttggattaccacggcaccatggaggcttacgccgccgctaaggccaagctg
ttcgcctggaatgatctcaagtgccgggtggtgaacctggacgatgacttcggtcgccaa
ttggccgccgaagacagcgaagcgcgcctgatcagctacagcctgcacgattcaagtgcc
tacctgtattgccgcgaagcccagttcaacgacgaaggcgtgcgtgccaccctggtgacg
cctcagggcgaacatcacctgcgcagtacattgctcggccggttcaacctgagcaacgta
ctggctgccatcggcgcattgctgggcctggactacgccctggacgaaattttaaaagta
ctgccgaagctggaaggcccggccggccgtatgcagcgtctgggtggcggcaaacagccg
ttggtggtggtcgattacgcccacacgccggacgccctggaaaaagtcctcgaagcgctg
cgcccccacgccaagggcaaattactgtgcctgttcggctgcggcggtgatcgtgatcgc
ggcaagcgcccgctgatggccgagattgttgaacgtctggctgacggtgtgttggtcacc
gatgacaacccgcgcagcgagaacccgagccagatcttcgacgatatccgtgcaggcttc
aaagacgtatccaaggccaccttcgttgccggccgcggtgccgccatcgcccaactgatc
gccggcgccagcgccgacgatgtggtggtactggccggtaaaggccacgaggactatcag
gaaatcaacggcgagcggcatgccttttccgatctggtcgaggctgatcatgccttgagc
gcctgggaggttgcccatgcttaa
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