Pseudomonas rhodesiae: HRH33_06640
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Entry
HRH33_06640 CDS
T07097
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRH33_06640 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_06640 (nth)
Enzymes [BR:
prx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HRH33_06640 (nth)
DNA repair and recombination proteins [BR:
prx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HRH33_06640 (nth)
Prokaryotic type
HRH33_06640 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF2400
DprA_N
DUF4817
Motif
Other DBs
NCBI-ProteinID:
QKJ72254
LinkDB
All DBs
Position
complement(1498106..1498744)
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AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT
PEAIYALGVEGLSEYIKTIGLYNSKAKNVIETCRLLIERHGSEVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIARGKNVVEVEKQLMKFVPKPYLLDSHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKDKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcaaaacgcctggaaatttttcgcaggcttcacgaagacaatcctgaaccc
aagaccgagctggcttactcgtcaccgttcgagctgctgattgcggtgatcctgtcagcc
caatccacggacgtgggtgtcaataaggccacggccaagttatttcccgtggccaatacg
cctgaagcaatctatgccctgggcgttgaagggctgtcggagtacatcaagaccatcggc
ctttacaacagtaaggccaagaatgtgatcgagacctgtcgcttgctgatagagcggcac
ggcagcgaagtgccgcaaacccgtgaagcattggaagccctgccaggcgtgggtcgcaag
accgccaacgtggtgctcaacaccgcctttcgacaactcaccatggccgtggatacgcat
attttccgagtcagcaaccgcaccggtattgctcgcgggaaaaacgtggtggaggtggaa
aagcaactgatgaagttcgtgcccaagccctacctgctcgattcccaccactggcttatc
ctgcatggacgctacgtctgccaagcccgaaagccccgttgcgggagctgtcggatcgaa
gatttgtgtgaatacaaagacaagacatccgacgattga
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