Pisum sativum (pea): 127086724
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Entry
127086724 CDS
T08598
Name
(RefSeq) ATP-dependent helicase rhp16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
psat
Pisum sativum (pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psat03400
]
127086724
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
127086724
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Sec20
Motif
Other DBs
NCBI-GeneID:
127086724
NCBI-ProteinID:
XP_050883474
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Position
5:complement(587454855..587458952)
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AA seq
684 aa
AA seq
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MELRRSQCISNARSSGPILRRYIEEENAGESRSIVVDEVIENKDNNEPPMVQVPQQPLPI
DNYREKDYKSEMLNETAEASSDFILPLLRFQKEWLAWALNQEQIYRGGVLADEMGMGRTI
EAIALVLAKRELQQNGFVFSQSPLPSSSEALPLIEGTLVICPVVAITQWVNEIDRCTLKG
STKVLVYHGADRIKNWEQFSKYDFVITSYSIVESECRNMSNWRDRNCEGPGFVRQAKHSK
QVKKNKSNAMPALHAVKWQRIVLDEARYIKDKRSKTTQAVFALESTYKWALSGTPFQNRP
RELYTLIRFLQINPYSYYFCKHCNCRVLQHRYELCSDCSHDFRDHFNWWKKYIAKPIESS
RSNDICGKKTMILLTHTILKNLVLRRTKIGRAADLALPPRIVSVRRDFLDREELDYYETL
YKEFQAKYNRYVRENTMGDHRFEIVGLITRLRQVTNHRYLVEFSQKEELNAEDLASSAAD
KQESGICHKPEEDPVDLTSNKDVRDDDDKIMVKYFRSSRILKNIELENFQTSTKLEALRE
EIRFMIERDGSAKGIVFSGFSLFVDLIYYSLYKSGVSCVRLNENMSQDARDAVVHRFNVE
PDCRIFVMTFMAGGIALNLTVASHVFIMDPSWNPALELQALDRIHGIHGIGQYKPTRVVK
FVIANTVEEMILKVQEKKKQVVQG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgtcgtagtcaatgcatttccaacgcaagatcatctggaccaattttgagg
agatacatagaagaagaaaatgcaggagaatcgagaagtattgttgttgatgaagtaata
gagaacaaagataacaatgaaccgccaatggttcaggttccgcagcagccacttcccatt
gataactatagggaaaaagattataagagtgaaatgttgaatgaaactgcggaggcctcc
tctgatttcattctacctttgcttagattccaaaaggaatggttggcttgggctttgaat
caggaacaaatatacagaggtggagtgcttgcggatgaaatgggaatgggaaggaccatt
gaagcaattgcccttgtccttgccaaacgagaactccaacaaaatggatttgtattttca
caatcacctttaccatcttcttctgaagcgttgccattgattgaaggaactcttgtcatt
tgccccgtggtagctatcactcagtgggtcaatgagattgaccgatgtactttgaaagga
agtaccaaggttctagtttatcatggggctgacagaattaagaattgggaacagttctcc
aagtatgattttgtgatcacttcatactctattgttgaatctgagtgcaggaatatgtcg
aattggcgtgacagaaattgtgaaggacctggttttgttagacaagcaaaacactccaag
caagttaagaaaaataaatcaaatgctatgccagctctacacgctgtaaagtggcagcga
atcgtactagatgaggcacgctatataaaagataaacgttctaaaaccactcaagcagtt
tttgctttagaatctacatacaaatgggcactaagtggcactccatttcagaaccgtcct
cgagagttgtatactctgataaggttcctacagataaatccttattcctattacttttgc
aaacactgtaattgtagagttcttcagcacaggtatgaattatgttcagactgctcccat
gattttcgggatcatttcaattggtggaagaaatacattgctaaaccaattgaatcttct
cgatccaatgatatttgtgggaaaaaaactatgatattgctcacacacacaattttgaaa
aacttggtactaagacgcacaaaaataggcagggctgctgatcttgcacttccacctaga
attgtttcagtgagaagggatttcttggatagagaagagctcgactattatgaaacatta
tacaaggaatttcaagcaaaatataatagatatgttagagaaaatactatgggggatcac
cgttttgaaatcgttggcctaatcacacggctgcgtcaggtaacaaatcatcgatacctt
gtggaattttctcaaaaagaggagttaaatgctgaagatctggcaagtagtgcagctgac
aaacaagaaagtggcatttgtcataagccagaagaagatcctgttgatttaacttccaac
aaggatgttagggatgacgatgataaaatcatggttaaatatttcagatcctcaagaatt
ttaaaaaacattgagcttgagaactttcagacaagcactaaattagaggctttgagagaa
gaaatcagattcatgattgaaagagatggttctgcaaaagggattgtttttagcgggttc
tcattattcgtagatcttatatactactctttgtacaagtctggagtatcttgcgttcgg
ttgaatgaaaacatgtcacaggacgcacgggatgctgttgttcatagatttaatgttgaa
ccagactgcagaatttttgtcatgacctttatggctggtggtattgcactcaatttgaca
gtagcatcacatgttttcattatggacccttcttggaatccagctttagagcttcaggct
ctagacagaattcacggaattcacggaattgggcaatataaacctacaagagttgtgaag
tttgtcattgcaaacacagttgaggagatgattttgaaggtacaggagaagaagaaacaa
gttgttcaagggtaa
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