Lathyrus oleraceus (garden pea): 127091870
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Entry
127091870 CDS
T08598
Name
(RefSeq) ABC transporter I family member 21-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127091870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127091870
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127091870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
NACHT
AAA_15
AAA_28
SMC_N
AAA
AAA_23
AAA_22
AAA_25
AAA_7
SRP54
AAA_18
AAA_30
PduV-EutP
AAA_5
AAA_33
Zeta_toxin
AAA_14
Arf
AAA_16
AAA_24
Motif
Other DBs
NCBI-GeneID:
127091870
NCBI-ProteinID:
XP_050886547
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All DBs
Position
6:86315941..86320337
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AA seq
295 aa
AA seq
DB search
MAKEKQQENENSGGIRVQGMQFSYDGLQQLPPLFLDFNLHVSPGSRCLLVGANGSGKTTL
LKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGDFSA
EHMIFGVEGIDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLLPYKVLLLDEVT
VDLDVVTRMDLLEFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRKAEKISDV
NELKSSTNLLSVVESWLRAETKIEKKKPVNNTSNAQGNSFASSPFFSSRHMAYYR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaaaaacaacaagagaatgaaaactccggaggaatccgagtccaaggcatg
cagttctcatacgacggactacaacaactaccgccgcttttcctcgacttcaacctccac
gtctctcctggatctcgatgcctcctcgtcggtgctaacggatccgggaagacgactttg
ctcaagattttggctgggaaacatatggttggaggaaaagacgttgtgcgtgtgttgaat
tgttccgcttttcatgatacgcagcttgtttgtagtggagatcttgcttatttgggcgga
tcttggagtaaaaacgttggctgcgctggagacattccactccagggagacttctctgca
gaacatatgatatttggtgtcgaaggcattgatccagacaggagagacaagttgattgag
ctgcttgatatagatctgcagtggcgaatgcataaggtttccgatgggcagcggcgtaga
gtgcagatctgtctgggtcttcttcttccatataaggtcctcttgctggatgaggttaca
gttgacctggatgttgttacccgaatggatttattggaattcttcaaggaagaatgtgag
cagagagaagctacaattgtatatgcaactcacatttttgatggactagagacatgggca
actcatttggcatacatacaagaaggtgaactaagaaaagcagaaaaaatatcagatgtt
aatgagttgaaatcttcaactaatctactatctgttgttgagtcctggctccgtgctgaa
acaaagattgaaaagaagaaacccgtcaacaatacatctaatgctcaagggaattcattc
gctagctctccattcttttcatccagacacatggcatattatcgatag
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