Lathyrus oleraceus (garden pea): 127093121
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Entry
127093121 CDS
T08598
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04075
Plant hormone signal transduction
psat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127093121
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127093121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psat03000
]
127093121
Transcription factors [BR:
psat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127093121
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
127093121
NCBI-ProteinID:
XP_050887980
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All DBs
Position
6:336981382..336985605
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AA seq
717 aa
AA seq
DB search
MPLYELYRLAREKLGNETNTTSVADQPSSPENDFFELVWESGQISSQGQSSRGRKSSPSC
RSLPSHCLPSHSPRGREKDVGGGYGNNPKIGKFGDLESGLNEIPISVPSREVDEMMPWLD
YSMDGSLQNEYGSNFLHELQVTENDIPASNNFTLFDKRSSGNQIFRDSNKNSAEPMNVSK
GSSAEQVETARNKASTNQLYPPSSNQCQTSFVTVRSRDTDITENNNASKGNQDVPYGEIS
RIPSSSSDFSSLKAQKQDPKMCGNNGSNVMNFSHFARPAAIVRANLQNIGLKSGLISATA
RPDSIGIKNRGEASTSSNPPESTLVNSSGECSKEPEIRCQKAAVQSKADLKPLHPKSLET
NAVASKQSEPVCKESGIKKDQPSNQVLGDGGAKVQTAAEKGMEAAAVASSSVCSGNGADR
ASDDPNRDLKRKSRDTDDSECHSEDVEDESVGVKKGGSGRGVAGSKRSRAAEVHNLSERR
RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPQMMLPP
GMQHMHAPHMAAFSPMSIGMHMGLGMGYGMGIPDMNGGSSRFPMMPQMQGTHITMSGPSA
IHGMARSNPQGFGLPGQGVSMPMPRAPVFPFSGGPVLNSSAPGPSAYGSTGPVETANPAS
VSGSKDPMRNVDSQIKQNIGGRDPTNQIPNQSALAHTGGHPSVADDSGASNPGNITL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttatgagttataccgtttggctagagagaagcttgggaatgagactaacacc
acaagtgtagctgatcaaccttcctcacctgagaatgatttttttgagctggtttgggag
agtggtcagatttcgagccaaggtcaatctagtagaggtagaaagagtagtccatcttgc
aggagtttgccatctcactgcttaccgtcacatagcccgagaggtcgagagaaagacgtt
ggaggaggatatggtaacaatccgaagataggaaagtttggtgatttagagtctggtttg
aatgagattccgatatcggtgccatctcgcgaagtagatgaaatgatgccttggttggat
tattcaatggatggttctttgcaaaatgaatatggttctaatttcttacatgaactacag
gtcacggagaacgacatccctgcatcgaataactttactctattcgataaaaggagtagt
ggaaatcagatatttagagactcaaataaaaattctgcagaaccgatgaatgtttctaag
ggttcttcggctgaacaggttgagactgcgagaaataaagctagcacaaatcagttatat
ccgccgtcgtcgaatcaatgtcaaacatcatttgtgactgttagatccagggatacggat
ataactgaaaacaataatgcaagtaaaggtaaccaggatgttccttatggtgaaattagt
cgcattccatcttcctcgagtgatttttctagcttaaaggcgcagaagcaagatcctaaa
atgtgtggcaataatggttccaatgtaatgaatttttcccatttcgcaaggcctgctgct
attgtgagagctaatcttcagaacattggattgaagtctggtttgatttcagctacagca
agaccagatagtattggaattaaaaatagaggtgaagcttcaactagcagcaatcctcct
gaatcaactcttgttaattcaagcggtgagtgttcgaaggaaccagaaattcgctgtcag
aaggcggcggtgcaatccaaggctgatttgaaacctttgcatccgaaatctcttgaaacg
aatgctgtagcttctaaacaatctgagcctgtttgcaaagagagtggaattaagaaagat
caaccttccaatcaagttcttggcgacggtggcgctaaagtacaaacagctgctgagaaa
ggtatggaggcggcggcagtagcttcttcttctgtttgctctggcaacggtgcagacaga
gcctcggatgatccaaatcgagatttgaaacgaaaaagtagagacaccgatgactctgaa
tgccatagtgaagatgttgaggatgaatcagtcggtgttaagaagggaggttccggacga
ggagttgcaggttccaaaagaagccgtgctgctgaagtgcataatctatctgaaaggagg
cgaagagaccggataaatgagaagatgcgtgcattacaagaactcatacctaactgcaat
aaggtggataaagcttctatgctcgatgaggcaattgagtatctaaaaacacttcagctc
caagttcaaatgatgtcaatgggtgctggtttatatatgcctcaaatgatgttacctcct
ggaatgcagcacatgcatgcaccacacatggctgctttttcgcctatgagcattggcatg
catatggggttaggtatgggttatggaatgggaatacctgacatgaacggcggatcttct
agatttccaatgatgcctcagatgcaaggaactcatatcactatgtctggaccttctgcc
atacatgggatggcaagatcgaatcctcaagggtttgggctaccaggtcagggagtttcc
atgccaatgccgcgagctcctgtgtttcctttttcaggagggcctgttttgaactcatca
gctcctggaccatctgcgtatggatccacaggacctgttgaaaccgcgaatccggcttca
gtgtctggctcaaaagatccaatgcggaatgtggactctcaaattaaacaaaacataggt
ggccgtgaccctacaaaccagatccctaatcagtcggctttggcgcatactggtggtcat
ccctcggtggctgatgacagtggagcttctaatcctggaaatatcactttgtga
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