Pisum sativum (pea): 127097902
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Entry
127097902 CDS
T08598
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
psat
Pisum sativum (pea)
Pathway
psat04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
127097902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127097902
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
127097902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
127097902
NCBI-ProteinID:
XP_050892342
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All DBs
Position
6:complement(320155001..320168761)
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AA seq
948 aa
AA seq
DB search
MGVPAFYRWLADRYPLSIADVVEEEPTVTDDGVPLPIDASTPNPNGMEFDNLYLDMNGII
HPCFHPDGKPAPATYDEVFKLIFDYVDHLFLLVRPRKLLFLATDGVAPRAKMNQQRSRRF
RAAKDAAESEAEEERLRKESISEGTLLSSKDKPETSDSNVITPGTKFMAALSVALQSYVQ
TRLNLNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNVPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVITLPGQQDKCFVCGQVGHYAADCHGKPETKTEDGSPADDKPIHKK
KYQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMHLYRKEFTAMGGYLTYAGEVFLDRVEYFIQSVAVHEDQIFQKRVRIQQMAENNEE
MRARARGVMLQEPRPSLSDKVKLGQPGYKERYYVEKFGVSSLEEIDKIKKDVVLKYVEGL
CWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQLMGVLPASSS
NALPEKYRDLMTNPSSPIFHFYPADFEIDMSGKKFAWQGVAKLPFIDEKKLLAATRKLED
TLTMQEDEQLRNSVMLDLLYVNRAHDLASHILLYYQVYGQLPTHERCVSPIKANASGGMN
GYLWACERNVLTSIVLSPIDGLPDIESNQVLNITYLNPSKHGHIPKPPDGVVIPKKLVKD
TDIKPFPMLWHEDNAGRGQQGRERPQLPGAITGFQLGEAAHRLVKNTLNIKWNNTSHVRT
EQPPVRHTVNRFQSTGPSGYGTYYGENTNSYNEEYNHHGVMTRHRYPVSSNGGHIDRQNF
RIQDRSRYQEQLQNVNNGFSSLTMEEGSRPRPSRPSISRPATNFEPRYVQNAGPPTPPPK
WNAKAPINGIYTRHQEATYGAVPRDKPVKKVYQVKTRLPQEPPDSGNQ
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccagctttttaccggtggctcgccgaccgttacccactctcgatcgccgat
gtagtcgaagaggaaccaaccgtcaccgacgacggcgttcctttgcctattgacgcgtcc
acgccaaatcccaacggaatggagttcgacaacttgtacttggacatgaacggcatcatt
catccttgttttcaccctgatggcaaaccagcgccagctacttatgatgaagtgtttaaa
ttgatatttgattacgttgaccatctctttttgttggttcgtccgaggaagcttctcttc
cttgcaactgatggtgttgcaccacgagcaaaaatgaatcagcaacgttctcggcgcttc
cgagctgcaaaagatgcagccgagtctgaagcggaagaggaaaggctgaggaaagaatcc
atcagtgagggaacacttttgtcttccaaagataagcccgagacttcagactcaaatgtc
attacccctggtactaaatttatggcagctctgtcagtggctcttcagtcttatgtacag
actagattgaacctcaaccctgcctggaaaaatataaaggttatactttctgattcaaat
gttcctggtgagggagaacataaaataatggaatacatccggttacaacgtaatgttcct
ggtttcaatccgaatactcgccattgtttgtatggtttggatgctgatttgattatgctc
tccttagctactcatgaggttcacttctcaatattgagggaggtaattactttacctgga
caacaggacaagtgttttgtgtgtggccaagttggccattatgcagctgattgtcacggt
aagccagaaactaaaactgaggacgggagtcctgctgatgataaaccaattcacaagaag
aaatatcagtttcttaatatctgggtgcttcgtgaatatttgcaatatgaattggagatt
cccaaccctccttttgagattgactttgaacgagtagtggatgattttgtatttctatgc
ttctttgtcggcaacgactttcttcctcatatgccaacattagagatcagggagggagct
ataaatttactgatgcatctatatagaaaggagtttactgccatgggtggctatcttact
tatgcgggcgaggttttcttagatagagtggaatactttatccaatctgtcgctgttcat
gaagatcaaatctttcagaaacgagttcgaattcagcagatggcagaaaataatgaagag
atgagagctagggcaagaggagtaatgcttcaagagccacgaccctcactttccgataag
gtcaagttagggcagcctggatacaaagaaaggtattatgttgaaaagtttggtgtatca
agtctggaggagattgataaaattaagaaagatgtagttttgaaatatgtggaaggcctt
tgttgggtttgccagtattattataatggtgtatgctcatggaaatggtactacccgtat
cattatgctccttttgcttccgatcttaaagatctccctaatctagaaataattttttcg
ccgggagagccattcaaaccatttgatcagcttatgggagtcctacctgcttcaagttca
aatgcactgcctgaaaaatatagggatttgatgaccaatccttcatcaccaattttccac
ttctaccctgctgatttcgagattgatatgagtgggaaaaaatttgcatggcagggtgtt
gccaaattgccatttattgacgagaagaaattacttgccgccacaaggaagcttgaagac
acgttaacgatgcaggaggacgaacaacttcggaatagtgtgatgcttgatttgctttat
gtcaaccgtgcacatgatttggcttcacatattttattgtattaccaagtttatggccaa
ttacctactcatgaaagatgtgtttcaccgattaaagcaaatgctagtggtgggatgaac
ggatatctttgggcatgtgagaggaatgttttgacctctattgtattgtctcccattgat
ggattgccagatattgagagtaatcaagtcttaaatattacatatcttaatccttctaag
catggacacatcccaaaacctccggatggtgtagtgatacccaaaaagttagtaaaagac
actgatatcaaaccttttcctatgctatggcatgaagacaatgctggtcggggacagcaa
ggcagggaaaggccacagttacctggagcaattactggatttcaattaggagaagcagct
catcgtcttgtcaagaacacccttaacattaaatggaataatacatctcatgtacggaca
gagcaacctccagttcgccatacagtgaacaggttccaatcaactggaccatctggatat
ggaacatattatggcgagaacacaaacagttataatgaagaatataatcaccatggtgta
atgactaggcatagatatccagtctcatctaatggtgggcacatagacaggcaaaatttt
agaatacaagataggtcacggtatcaagaacaactccaaaatgtgaacaatggattttct
tctctaacaatggaggaagggtcgagacctagaccatcgaggccgtcaatttctcgacca
gcaaccaattttgaaccccgatatgtgcagaacgcaggtcctccaacaccacctccaaag
tggaatgctaaagcacctataaatggaatatatactaggcatcaagaagctacatatggg
gcagtaccccgggataaaccggtgaagaaggtttaccaagttaaaacacggttgccccaa
gaacctccagacagtgggaatcaatag
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