Pisum sativum (pea): 127105669
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Entry
127105669 CDS
T08598
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
psat
Pisum sativum (pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psat03400
]
127105669
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
127105669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
ResIII
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-Nse
zf-RING_6
zf-C2HC_2
Methyltransf_17
Motif
Other DBs
NCBI-GeneID:
127105669
NCBI-ProteinID:
XP_050898828
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All DBs
Position
7:436481172..436491952
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AA seq
880 aa
AA seq
DB search
MELRPRRLLTDDVDSAAEKGKQPMDDSDGKCDSDTESDLGSFLKSDSDYEAEAVDEHLTF
DLNQVPTLSGNDSDCDSLAKKIMALSRKRGRESLIKIEGLSDLERELEHGDEASIDSPKE
KKKRKANKTKKGVPKPVLLWHAWRDEHERWIDQNLLEDVNLDQSEVMNETAEASSDLIVP
LLRYQREWLAWALEQENSVSRGGILADEMGMGKTIQAIALVLAKREFQQMSREPDEHPHS
PGSSKVLPAIKGTLVICPVVAVTQWVSEIDRFTLRGSTKVLVYHGAKRGKSAEQFSEYDF
VITTYSIVESEYRRYVMPPKEKCLYCGRLFYESKLIIHQKYHCGPGAIKTEKQSKQTKKK
KSGQSSKWDGGLKQGSIKKKKNEISSRIEDNEKSWLHAVKWQRIILDEAHYIKSRHSNTA
KAVLALESFYKWALSGTPLQNRVGELYSLVRFLQIVPYSYNLCKDCDCRMLNHSSSRQCS
NCPHSSVRHFCWWNKNIATPIQSYGYGDGGKRAMILLKNKILKSIVLRRTKVGRAADLAL
PPRIVSLRRDSLDTKEQDYYESLYSESQAQFNTYVQENTLTNNYAHIFDLLTRLRQAVDH
PYLVVYSPTAAALKGGNLVSNGNVEVECGLCHDAVEDPVVTSCEHTFCKGCLIDFSASLG
QVSCPSCSKLLTVDLTSNKDTVVHRTTIKGFRPSSILNRIQIENFQTSTKIEALREEIRS
MVEMDGSAKAIVFSQFTSFLDLINYSLQKSGVSCVQLVGSMTLAARDVAIKKFTEDPDCR
IFLMSLKAGGVALNLTAASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTI
EERILKLQEKKELVFEGTVGGSTEALGKLTVADLRFLFVT
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaactccgtcctcgtcgactccttaccgatgatgtggattctgcggctgagaagggg
aagcagccgatggatgattctgatggaaagtgtgacagtgacactgaaagtgatcttggt
tcgtttttgaaatctgattctgattatgaagctgaagccgttgacgagcacttaactttt
gacttgaatcaagtcccaactttaagcggaaatgattctgattgtgattctttagctaaa
aagataatggcactgtctcgaaagagaggaagagaatccctgataaaaatcgaaggcctg
agtgatttagagagagagctggagcacggtgatgaagcttcaattgattcacctaaggag
aaaaagaagcgaaaagcaaataaaacgaaaaagggagttcctaagccagtgttgttatgg
catgcttggagagatgagcatgaaagatggattgatcagaatttgttggaagatgttaac
ttagatcaaagtgaagtgatgaatgagactgccgaggcatcgtcagatctgattgttcct
ttgctgaggtaccaaagggaatggttagcatgggctttggagcaagaaaattctgtaagt
agaggaggaatcctcgccgatgaaatgggtatggggaaaactattcaagcaattgccctt
gttcttgctaaacgtgaatttcaacaaatgagtcgcgaaccagatgaacacccacattca
cccgggtcatctaaagtccttcctgcgatcaaaggaacccttgtcatctgtcctgtggtt
gctgttactcagtgggttagtgagattgatcgatttactttgagaggaagcaccaaggtt
ctggtttatcatggggcaaagagagggaagagtgctgaacagttctcagagtatgatttt
gtaataacaacatattctattgttgaatcggagtacagaaggtatgtgatgcctcctaag
gagaaatgcctatattgtggaagattattttacgagagtaaattaattattcaccagaag
taccactgtgggcctggcgctattaaaactgaaaaacaatcaaagcagacaaagaaaaag
aaaagtggtcagagttcaaagtgggatggagggttgaagcagggctctatcaagaagaag
aagaatgaaatatcctcaagaatagaagacaatgagaagtcttggctccatgctgttaag
tggcagaggatcatattggatgaggcccactatataaaatctaggcattctaacactgca
aaagcagttcttgctttagagtctttctacaaatgggcattaagtggcacaccccttcag
aaccgtgttggagagctatattctttggtacgatttctgcagatagttccttattcctat
aacctatgcaaggactgtgattgcaggatgcttaatcatagctcctctagacaatgttca
aattgcccccacagttctgttaggcatttttgttggtggaacaaaaatattgccacacca
attcaatcatatggatatggtgatggggggaaaagagctatgatattgctcaaaaacaaa
attttaaagagcatagtgttaaggcgaactaaagttggcagggctgctgatctggcactt
cctcctaggatcgtatcattgaggagggatagcctagatacaaaagaacaagattattat
gaatcactatacagtgaaagtcaagcacagtttaatacgtacgtacaagaaaatactctg
acgaataattatgctcatatttttgacctcctcactcgactacgtcaggctgtggatcat
ccttatcttgtggtgtattctccaactgcagcagcactaaaaggagggaacttggttagt
aatggtaatgttgaagtagaatgtggcctttgtcatgatgcagttgaagatcctgtggtt
acctcttgtgagcataccttttgcaagggatgcttgatagatttctctgcttccttaggt
caagtatcatgcccctcatgctctaagttactcactgttgatttgacttccaacaaggat
actgtggttcatagaacaacaattaaggggttcagaccttcaagcattttaaacagaatc
cagattgagaattttcagacaagtactaaaatagaggcattgagagaagaaattagatct
atggttgaaatggatggttctgcaaaagctattgtttttagccaattcacatcattcttg
gatctcataaactactccttgcaaaagtcaggtgtatcttgcgttcaactggttggaagt
atgacattggctgctcgggatgttgccattaaaaaatttaccgaagacccagactgtaga
attttcctaatgagcttgaaagctggaggcgttgctctgaatttgaccgcagcatctcat
gttttcctcatggatccttggtggaaccctgcagttgagcgtcaggctcaagacagaatt
caccgtatagggcaatacaaaccaatcagaattgtgagatttgtcattgaaaacacaatc
gaggagaggatcttgaaacttcaagagaagaaggaattagtatttgaagggactgtaggt
ggttctacagaggctctagggaagttaacggtggccgacttgagatttctctttgttacc
tag
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