KEGG   Pisum sativum (pea): 127120700
Entry
127120700         CDS       T08598                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1 isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
psat  Pisum sativum (pea)
Pathway
psat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127120700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psat03021]
    127120700
Enzymes [BR:psat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127120700
Transcription machinery [BR:psat03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127120700
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 RNA_pol_Rpb1_5 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 127120700
NCBI-ProteinID: XP_050907176
LinkDB
Position
2:complement(483305449..483321758)
AA seq 1549 aa
MRSSRLSDSMDDEDLATEHKVPSGLIKAIKFDVLSGEDIEKISSLEINAPGQVTCSDLGL
PNSSYGCTTCGSKDRKSCEGHFGAIKFPFTILHPYFMAEIAEILKKICPACKSIRHELRI
KRAKSLLGINNTPKGCKYCSGNGMGRYPAMKFRVSSNDFFRRTAIIVEVNDVSLNKKRNL
GRGLPADYWDFILGDAQPEENHVNRRVLSPVQVENLLSGVDSNFIEKYIPSMDLVGLSCF
LVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPD
RTPINIFTELQQRKVGENACNSSGLRWMKDVVLGKRNDSTFRTVVVGDPDLEISEIGIPC
QIAEGLQVSEYVNRQNKQNLLYCCELRLLEKGHINVRRKGNPVVLYKKEDLQIGDVIYRP
LVDGDKVLINRPPSIHQHSMIALTVRVLPISSVVSINPICCSPLRGDFDGDCLHGYIPQS
VGARVELNELVALDRQLINGQSGANLLSLSQDSLTAAYLLLQDGVLLNVYQIQQLQMLCN
RKLTPPAIVKAPSSNTSFWSGKQLVSMLLPSNFDYAFPSNDVFVSDGELISCSEASGWLR
DSENNVFQSLVEHFQGETLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARENMMEE
ISYGLREAEQACDFNQLLVNYFCDFLSGSLSDSDNVMTVDEDRLNYERQISAALSQASVD
AFRHVFRNIQSLADKYACNENSFLAMIKAGSKGNLLKLVQHSMCLGLQHSLVRLSYRIPR
ELTCAGWNNHKGLHSTEMFSDTLEPGQSYIAHAVVESSFLTGLNPLECFVHSVTNRDSSF
SDNADLPGTLTRRLMFFMRDMYDGYDGSVRNLYGNQLIQFSYDAEEDSSCDSNFREDIIG
GEPVGALSACAFSEAAYSALSQPISLLEASPLLNLKNVLECGSRKRGGDQTVSLFLSEKI
GKQRNGFEYAALEVKNYLERLMFSNVVSTVMIIFTPHSCNLEKYSPWVCHFHLDKENLTR
RNVEVHSIIDSLYQRYDSFRKDSKLTLPNMKISSNRKCCIDCMAKEGGETSVHKEKDCDD
CITVTLVEDSKNSVQLDAVRNVMIPFLLRTAIKGFLEIKKVDILWKDLPKVSKSYGSSGE
LYLRVTMSTENDSGAFWGSLINHCHRIMPLIDWTRSHPDNIHHFCSAFGIDAGWQQYLHN
LSSATSDTGKSILPKHLRLVANSLSASGEFVGLNAKGMARQRKHAAVSSPFVQACFSNPG
SSFLKAAKSGVVDNLQGSLDALAWGNCLPMGTGGQFDIIYSEKVQEIDKPVDVYGLLESS
FDQLEQETNTPQSHKYSSRNCNSEFRYKNGGYAPKESKQWKSVIRNNITVNDIQKLTTAS
RVILNKYPIEEILGERDKSTIMRVLHFHPRKNEKLGSGLEDIKVGWHPQFTDSRCFFIIR
TDGTVEDFSYRKCIIGALDIVDPEKSKIQKKKWSGNNDMEAKKWLGNDDMGAKKGYENHD
TGLKRWSESYDLKTKKWWRSDDLEDKKWSRNYDMEANNLLGNYDMEANK
NT seq 4650 nt   +upstreamnt  +downstreamnt
atgcggagctcaaggttatcagattcaatggatgacgaagacctcgctacagagcacaaa
gtgccatctggtcttataaaagcgataaagtttgatgttttaagcggggaagatatagag
aagatctcttctttggagataaatgcacctgggcaggtcacttgttctgatttgggactt
ccaaattcgtcttatgggtgcacgacgtgtggttcaaaagatagaaagtcctgcgaaggt
cattttggagcaatcaaatttccttttaccatattacatccatacttcatggcagagatt
gcagaaatcttgaaaaaaatttgccctgcatgtaaatctattcgacatgaattacggatc
aagcgtgctaaatcactccttggaatcaataatacgcccaaaggttgcaaatattgttct
ggaaatggtatgggtcgttatcctgcgatgaaattcagagtttcatccaatgatttcttc
aggagaactgcaattattgttgaagtaaatgatgtatctttaaataagaaaagaaatttg
gggcgaggactgcctgctgattattgggattttattcttggagatgctcaaccagaagaa
aaccatgtaaataggagggttttatcacccgttcaggttgagaatttattgagtggtgtt
gattcaaacttcattgaaaagtatataccaagcatggatttggttggtctcagttgcttc
ctggtggcaccgaattgtcatcgtgtcacggaagtccctcatcgactttctgggggatat
ccattgagttttgataacaggaccagagcttgcaagaaattggttgatttcaggggtaca
gcaaatgagttaagttctcgtgttttggattgcttgcggttttccaagataaatcctgat
agaacaccaattaatatttttactgagttgcaacaaagaaaggttggagaaaatgcttgc
aattcttctggcttaagatggatgaaagatgtagttcttggaaaacgcaatgacagtaca
ttccgaactgtggttgttggtgatccagacctcgagataagtgaaattggtataccctgt
caaattgcagaaggtttgcaggtttctgagtacgtaaatagacagaataagcaaaatttg
ctttattgttgtgagctgcgtttgctagagaaggggcatataaatgttcgcagaaagggt
aatccagttgttctgtataaaaaagaagatttgcagataggagacgtaatttatcggcct
ctcgttgatggggataaagtgttgataaatagacctccttccatacatcaacattctatg
attgctctcacagttagggttcttccaatatcttctgtagtatctattaacccaatctgt
tgttcacctctgcggggggattttgatggtgattgccttcacgggtatattccacaatct
gttggtgctagagtggagcttaatgagttggttgctttggataggcaactgattaatggg
cagagtggtgcaaatctgctttcactttctcaggatagtttaactgctgcatatttgctg
ttgcaagatggggtccttttgaatgtttaccaaatacagcaacttcaaatgctttgcaat
agaaaattaacaccccctgcaattgtaaaggctccttcaagtaatacctcattttggagt
ggcaagcaattggtcagcatgctcttgccttctaattttgactatgcttttccttcaaat
gatgtttttgtcagtgatggagagctgatatcttgttccgaggcttctgggtggttacgc
gattcagagaacaatgttttccaaagtcttgtggaacattttcaaggggagactttggac
attttgcatggtgcacagaaagctctttgtgagtggttgtctatgactgggtttagtgtt
tccctatcagatttgtacctttcttctgattcctatgcgcgtgaaaacatgatggaggaa
atctcatatggattacgagaagcagaacaagcttgtgatttcaaccagttattggtaaat
tatttttgtgattttctttcaggaagtctatcagatagtgacaatgttatgactgttgac
gaggatcgtctgaattacgaaagacaaatatctgctgctctaagtcaagcgtcagttgat
gcttttagacatgtttttcgcaatattcaaagtttagctgataaatatgcgtgcaacgaa
aatagtttccttgctatgattaaggctggaagcaagggtaatttactgaaattagtgcaa
cactccatgtgccttggactgcaacattccctggttcgcttgtcatacagaatcccccga
gaactgacttgtgctggttggaacaatcataaggggcttcattcaacagaaatgttttct
gatacccttgaaccaggccaatcttacattgctcatgctgtggttgaaagctcttttctt
actgggttgaacccacttgaatgttttgttcattcagtgacgaatcgtgacagctctttc
agtgacaatgcagaccttcctgggacattgacccgtagacttatgttcttcatgcgtgat
atgtatgatggatatgatggatccgtgagaaacttatatgggaatcaacttattcagttt
tcttatgatgctgaagaggattcatcttgtgatagcaattttcgagaggatattataggt
ggtgaaccagtcggagcgctttctgcttgtgcattttctgaggctgcatacagtgctttg
agtcagcctattagtctacttgaagcatcacctttgctgaatttaaaaaatgttctggag
tgtggttcaaggaaaagaggtggtgatcagaccgtgtctttatttttgtctgaaaaaatt
ggtaaacagagaaatgggtttgagtatgcagcactggaagttaagaattatttggaaaga
ttgatgttctcgaacgttgtttctactgtcatgataatattcactccacattcttgcaat
ctagaaaaatacagtccttgggtttgccattttcatttagacaaggaaaatttaacaaga
agaaatgtagaagtgcattctatcattgattctctttaccagcgatatgactccttcaga
aaagattcgaaactcactcttcccaatatgaaaatatcaagcaacaggaaatgttgtata
gattgcatggctaaggaaggtggagaaacctctgttcataaggaaaaagactgtgacgat
tgcatcaccgtcacgcttgtcgaagactctaaaaattctgtacaactggatgctgttcgg
aatgtcatgatacctttccttctgcgaactgcgataaaaggatttttggagatcaagaag
gttgacattctctggaaggatcttccaaaagtatcaaaatcttatggttcttctggtgaa
ctatacttgagggttaccatgtccaccgaaaatgacagtggtgcattctggggttcactg
ataaaccattgtcacagaataatgccattgattgactggacacgaagtcatcctgataac
attcatcatttctgctcagcctttggaatcgatgcagggtggcagcaatatctccataat
ttgtcgtctgcaacatctgacactggcaagtcaatccttcctaagcatctgcgtcttgtt
gccaatagtctttcagctagtggagagtttgtgggattaaatgctaaaggcatggcgcga
caaagaaaacatgcagctgtttcatcacccttcgtgcaagcatgcttttctaatcccggc
agttcctttttaaaggctgcaaagtctggagtcgtagataatctccagggcagtctagat
gcattggcttggggaaattgtctccccatggggacaggtgggcagtttgatatcatatac
tcagagaaggtacaagaaattgataagcctgtagatgtgtatggtctgctagaaagcagt
tttgaccagctagaacaagagactaatacccctcaatctcacaaatattcatccagaaat
tgcaattcagagtttaggtataaaaatggtggttatgccccaaaagagtctaagcagtgg
aaaagtgttataagaaataacattaccgtaaatgatattcagaagcttactactgcatca
agggtcatactgaacaagtatccgattgaggagatattaggtgagagggacaagtcaaca
ataatgagggttttgcattttcatcctcgtaaaaatgagaagcttggctctggactagaa
gacataaaggttggatggcatccccagtttacagatagccgttgcttttttataatacga
acagatgggactgttgaagatttttcataccgcaaatgcattattggtgctcttgatatt
gttgatcctgaaaagtcaaagatccaaaagaaaaaatggtcaggaaataatgacatggaa
gctaaaaaatggttgggaaatgatgacatgggagctaaaaaaggctatgaaaatcatgac
acagggctaaaaagatggtccgaaagctatgacctaaaaactaaaaaatggtggagaagt
gatgacttggaagacaaaaaatggtccagaaattatgacatggaagctaacaatttattg
ggaaattatgacatggaagctaacaagtga

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