Pseudomonas syringae pv. syringae B728a: Psyr_2969
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Entry
Psyr_2969 CDS
T00246
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT
KO
K18300
outer membrane protein, multidrug efflux system
Organism
psb
Pseudomonas syringae pv. syringae B728a
Module
psb_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_2969
01504 Antimicrobial resistance genes [BR:
psb01504
]
Psyr_2969
Transporters [BR:
psb02000
]
Other transporters
Pores ion channels [TC:
1
]
Psyr_2969
Antimicrobial resistance genes [BR:
psb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
Psyr_2969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
UDG
Motif
Other DBs
NCBI-ProteinID:
AAY38003
UniProt:
Q4ZS69
LinkDB
All DBs
Position
3560826..3562223
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AA seq
465 aa
AA seq
DB search
MSAYKVFIPSLLVMALAACAVGPDYQAPVTAPAKLASAAQGNYDRSKVDRVWWQQFEDPT
LNKLVARSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGITERR
VNSERYDLGLDMAWEVDLFGRIQRQLEASDADQDAAEANLYQLQVTLIAEVVDAYGQLRG
AQLREAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAAVEASVPQLQAEQARQ
RNRIATLLGERPENLSVDLSPSKLPAIAKALPIGDPTQVLRNRPDIRAAERQLAASTARI
GVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFDLGSVRAQIRSADA
DAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDASRSAARLASVQYREGTA
DFLVLLDAERERLAAEDAQAQAEIELYRGIVAIYKALGGGWQPQA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgtacaaagtcttcatcccgagcctgctggtcatggcactggcggcctgcgcc
gtaggcccggactaccaggcaccggtcacggcgccagcgaaactggcgtccgccgcccaa
ggcaactatgaccgcagcaaagtggacagggtgtggtggcagcagttcgaggacccgacc
ctcaataaactggtggccaggtcactggacggcaaccgcgatctgcgcgtcgccttcgcc
cggctcaagtcggcgcgcgccattcgcgatgacgtcgccaacgatgtgatgccagtggtg
accagccgcgccagcagtgacatcggcaagggtcagcaacccggcatcaccgagcgccgg
gtcaacagcgagcgctatgacctgggcctggacatggcctgggaagtggacctgttcggg
cgtatacagcgtcagctggaagccagcgatgccgatcaggacgctgcagaggccaacctc
tatcagttgcaggtcacgctgattgccgaggtggtcgacgcctacggtcaactgcgcggc
gcacaactgcgtgaagccattgcccgcgacaacctgaaaaatcagcaaagttctcaggac
gtgaccacgcaattgcgcgatgcgggcgtgggcaacgagctggatgtggtgcgtgccgag
gcacgactggccgccgtcgaggcgagcgttccgcagttgcaggccgagcaggctcgccaa
cgcaatcgcatcgccacgttactgggcgagcgtccggaaaacctcagcgtcgacttgagc
ccgagcaagctgccggccatcgccaaggccttgccgattggcgacccgacgcaagtgttg
cgcaatcggcccgacatccgcgcagccgagcgacaactcgctgcctcgaccgcccgtatc
ggcgtcgcgactgccgatctgttcccaagggtcagcctgagcgggtttctgggctttacc
gccggacgcggctcgcagatcggttcgtcagcggccagagcctggtcgctgggccccagc
atcacctgggcggccttcgatctgggcagtgtccgggcgcagattcgcagtgccgacgcc
gacgcagaaggcgcactggccaactatgagcagcaggtgctgctcgcgctggaagagtcg
gagaacgcgttcagcgactacgacaaacgccagcagcggctggtctcactgatgcgccag
agcgatgcgagtcgctcggcggccagactggcctcggtgcagtatcgcgaaggcacggcg
gactttctggtcctgctggatgccgagcgcgagcgtctggcggccgaggacgctcaggcg
caggcagaaatcgagctgtaccgtggcattgtggccatctacaaggcactgggtggcggc
tggcaacctcaggcctga
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