KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_3888
Entry
Psyr_3888         CDS       T00246                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
psb  Pseudomonas syringae pv. syringae B728a
Pathway
psb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Psyr_3888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psb03400]
    Psyr_3888
Enzymes [BR:psb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psyr_3888
DNA repair and recombination proteins [BR:psb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Psyr_3888
 Prokaryotic type
     Psyr_3888
SSDB
Motif
Pfam: HhH-GPD HHH Ogg-HhH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: AAY38918
UniProt: Q4ZPK4
LinkDB
Position
4629580..4630218
AA seq 212 aa
MNAAKRQEIFRRLHEDNPDPKTELAYTTPFELLIAVILSAQATDVSVNKATARLYPIANT
PQAIYELGVEGLSEYIKTIGLYNSKAKNVIETCRMLVELHNGEVPQTREALEALPGVGRK
TANVVLNTAFRQIAMAVDTHIFRVSNRTGIAPGKNVVEVERQLMKFVPKNYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCDYKAKTSDD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaatgccgcaaaacgccaggaaatctttcgcaggctgcatgaggacaatccggaccca
aaaaccgaattggcctacaccacgcctttcgaactgttgatagccgtcatcctttccgcc
caggccaccgacgtaagcgtcaataaggcgactgccaggctctacccgatagccaacacc
ccacaggccatctatgaactgggtgtagaggggctttccgagtacatcaagaccatcggc
ctctacaacagcaaagccaaaaacgtgatcgaaacctgccgcatgctggtggagctgcac
aacggtgaagtaccgcaaacccgagaagcactcgaggcgttgccgggcgtcgggcgcaaa
accgctaacgtggtgctcaacaccgctttccgccagatcgcgatggcggtggacacgcat
atcttccgcgtcagcaaccgcacaggcatcgcgccagggaaaaatgtggtggaagtggaa
aggcaactgatgaaatttgtgccgaaaaactacctgctcgacgctcatcactggctgatt
ctgcacgggcgctatgtttgccaggcccgtaaaccgcgatgtggcagttgccgtatagaa
gacctgtgcgattacaaggcaaaaacgtccgacgattga

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