Pseudomonas syringae pv. syringae B728a: Psyr_4008
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Entry
Psyr_4008 CDS
T00246
Name
(GenBank) Hydrophobe/amphiphile efflux-1 HAE1
KO
K18138
multidrug efflux pump
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb01501
beta-Lactam resistance
psb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Psyr_4008
01503 Cationic antimicrobial peptide (CAMP) resistance
Psyr_4008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_4008
01504 Antimicrobial resistance genes [BR:
psb01504
]
Psyr_4008
Transporters [BR:
psb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Psyr_4008
Antimicrobial resistance genes [BR:
psb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Psyr_4008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AAY39038
UniProt:
Q4ZP84
LinkDB
All DBs
Position
4772247..4775381
Genome browser
AA seq
1044 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSISSLPINQYPSIAPPAIGIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFNQGTNPDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLMVIGLVSEDGSMGKEDLANYIVSNMQDPISRTSGVGDFQVFGS
QYAMRIWLDPAKLNNFQLTPVDVKDAITAQNVQVSSGQLGGLPSISGQQLNATIIGKTRL
QTAEQFGNIFLKVNTDGSQVRLKDVATVGLGAENYSTDSQFDGKPASGLAIKLATGANAL
DTAKAIRATVSSLEPFFPPGMKVVYPYDTTPVVSESINGVVHTLIEAIVLVFLVMYLFLQ
NFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVM
EEEKLSPRDATIKSMTQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL
SVVVALIFTPALCATMLKPIDHEKHGQPKRGFFGWFNRTFDRSVLSYERGVGNMLKHKWP
AYLGYILICAGMVFMFMRIPAAFLPEEDQGVIFAQIQTPAGSSTERTQEVIDQMREYLLT
KESGAVKSVFSVNGFNFAGRGQSSAIAFVMLKPWEERDSNNSVFELAKRAQGYFFSLRDA
MVFAVVPPSVLELGNATGFDVYLQDQGGVGHDKLMEARNQFLGMAAQSKILAGVRPNGLN
DEPQYQLIIDDERASALGITLSDINNTLSIALGGSYVNDFIDRGRVKKVYIQGDAGARMT
PEDLKKWYVRNSAGEMVPFSAFASGKWSYGSPKLSRYNGVAAEEVLGTPAPGYSSGDAMN
EVEALAKKLPQGIGISWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPIAVI
LVVPLGVIGALMATSLRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKSLVDA
AIEACRMRLRPIIMTSMAFILGVVPLAISSGAGSGSQHSIGTGVIGGMITAVILAIFWVP
LFFVTVSGLFKSKQKHISHDEAGQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattttttattgatcgacccatttttgcctgggttattgccctcgtgatcatg
ctggtcggtgcgctgtcgatttccagcctgccgatcaaccagtacccgagcatcgcaccg
cccgccatcggtatccaggtcacctatccgggcgcgtctgcccagacggtgcaggacact
gtggttcaggtgatcgagcaacagctcaacggtatcgataacctgcgttatgtcagctcg
gaaagtaactccgacggcagcatgaccatcactgcgacgttcaatcagggcaccaacccg
gatacggcgcaggttcaggtgcagaacaagctcaacctcgcgaccccgctgctgccacag
gaagtgcagcaacagggtatccgcgtcaccaaggcagtgaagaacttcctgatggtgatc
ggtctggtgtcggaagacggcagcatgggcaaggaagacctggccaactacattgtgtcg
aacatgcaggatccgatctcgcggacctccggtgtgggtgacttccaggtgttcggttcg
cagtacgccatgcgtatctggctggacccggccaagctgaacaacttccagctgaccccg
gtggacgtgaaagacgcgatcaccgcgcaaaacgttcaggtgtcgtccggccagttgggc
ggcctgccatcgatcagcggtcagcaactgaacgccacgatcatcggcaagacccgtctg
cagaccgccgagcagttcggcaacatcttcctcaaggtcaacaccgacggctcgcaggtt
cgcctgaaagacgtcgctacggtcggcctgggcgcagaaaactacagcaccgactcgcag
ttcgacggcaaaccggcttccggtctggcgatcaagctcgccaccggcgccaacgcgctg
gacaccgccaaggccatccgcgcgaccgtttcctcgctggagccgttcttcccgcctggc
atgaaagtcgtgtatccgtatgacacgacaccggtggtcagcgaatcgatcaacggtgtg
gtgcacaccctgatcgaagcgatcgtgctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgcaaccatcatcaccacgatgacggttccggtggtcttgctgggtacgttc
ggcatcctcgcggccttcggtttcaccatcaacaccctgaccatgttcggtatggtgctg
gccatcggcttgctggtggacgatgcgattgtggtggtggaaaacgtcgagcgggtcatg
gaggaggaaaagctctccccgcgcgacgccacgatcaaatccatgacacagattcagggc
gcactggtcggtattgccctggtgctgtcggcggttctgttgccgatggcgttcttcggc
ggctccaccggggtgatctacaagcagttctcgatcaccatcgtctcggccatggccctg
tcggtcgtggttgcgctgatcttcaccccggcgctgtgcgccaccatgctcaagcccatc
gatcacgagaagcacgggcaaccgaaacggggtttcttcggctggttcaaccgcaccttc
gaccgcagcgttctgagttacgagcgcggcgtcggcaacatgctcaagcacaagtggcct
gcgtatctgggttacatactgatctgtgcgggcatggtgttcatgttcatgcgtattccg
gctgcgttcctgccggaagaagaccagggcgttatcttcgcccagatccagacaccggcc
ggctcctcgaccgagcgcacgcaggaagtcatcgatcagatgcgtgagtacctgctgacc
aaggaaagcggcgcggtgaagtcggtgttctcggtaaacggcttcaacttcgcgggccgc
ggtcaaagctcggcgattgcgttcgtgatgctcaagccgtgggaagagcgtgattccaac
aacagcgttttcgaactggccaagcgggctcaaggctatttcttcagcctgcgcgacgcg
atggtgtttgcggtcgtcccgccctcggtactcgaactgggtaacgccacaggcttcgac
gtctacctgcaggatcagggcggcgtgggtcacgacaagctgatggaagcgcgtaaccag
ttcctcggcatggcagcacagagcaagattctggcgggcgtgcgtccgaacggtctgaac
gacgaaccgcaataccagttgatcatcgacgacgagcgcgccagtgcattgggcattacc
ctgtcggacatcaacaacaccctgtccatcgcgttgggtggcagctacgtcaacgacttc
atcgaccgtggccgtgtgaagaaggtgtacatccagggcgatgcaggcgcgcgtatgacg
cctgaagacctgaagaaatggtacgtacgcaacagcgcgggcgagatggtgccgttctcg
gccttcgctagcggcaaatggtcctatggctcgccgaaactgtcacgctacaacggcgtg
gcggcagaggaagtactcggtactccagcccctggctacagcagcggcgacgcgatgaac
gaagtcgaggcgctggccaagaagctgccgcaaggtatcggcatctcgtggaccggtctg
tcctacgaggaacgcctgtccggttcacaggcccctgccctgtatgccctgtcgctgctg
gtcgtgttcctctgtctggcggcattgtatgaaagctggtcgattccgatcgcggtcatc
ctcgtggtgccactgggggttatcggtgcactgatggcaaccagcctgcgcggtctgtcc
aacgacgtgttcttccaggtcgggttgctggtgacggtgggtctggcggcgaaaaacgcc
attctgatcgtcgagttcgccaaagagcttcacgaacagggcaagagcctggtcgacgcg
gcgatcgaggcctgccgcatgcgtctgcgcccgatcatcatgacctccatggccttcatc
cttggcgttgtgccgctggcgatttcctcgggcgcaggttcgggtagtcagcattcgatc
ggtactggcgtaattggcggtatgatcaccgcagttattctggcgatcttctgggtgccc
ctgttcttcgtaacggtttcagggctcttcaagagcaagcagaaacatatttcacacgat
gaggctggccaatga
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