Prevotella scopos: J4856_03305
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Entry
J4856_03305 CDS
T08373
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pscj
Prevotella scopos
Pathway
pscj01501
beta-Lactam resistance
pscj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J4856_03305
01503 Cationic antimicrobial peptide (CAMP) resistance
J4856_03305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pscj02000
]
J4856_03305
01504 Antimicrobial resistance genes [BR:
pscj01504
]
J4856_03305
Transporters [BR:
pscj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J4856_03305
Antimicrobial resistance genes [BR:
pscj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J4856_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QUB44052
LinkDB
All DBs
Position
1:complement(865478..868678)
Genome browser
AA seq
1066 aa
AA seq
DB search
MFKIFIRRPVLSIVVSLVIAFIGILSLSNLPITQFPSISPPKVNVIANYPGANNELLVKS
VIIPLEQALNGIPGMKYIESDAGNDGEAELNVVFKLGTDPNVDAVNVQNRVSSATNKLPP
EVIREGVKISREEPNILMYINLYSDDPEVDQSFLYNYFDINISPELLRVDGVGDLDILGT
RNYAMRVWLHPDKMVAYGLSTDDVSDALEDQNIEVSPGKLGESGGIRPQVKEYVLKYPGR
YTSEEEYKNIIVKSDNNGNIVRLKDIADVHLGSEVYDIYSTFNGRPSAAVTLKQAYGSNA
RNVISKVKDAMSHLQKDMPKGMHYEISYDVSRFLDASIEKVIHTLFEAFILVAIVVFIFL
GDWRASIIPIMAVPISLLGSFIAMMLFNITLNMISLFALVMAIGIVVDDAIVVIEAVNVE
ISRNNLTPIEATEKAMKEISGAIIAISLVMASVFIPVAFMGGPEGMFYRQFSITMASSIL
FSGFVALTLTPALCALILTKEQENNVKLGIVGRVLKRFNAKFDTGRSRYEHIIEHTVKKK
AFTIILILAFCGLAYWINLGLPSGFIPQEDQGMIYAVIETPPSATIERTNAVAQKLLKIA
EKEQDVESVSSLAGFEILSEGTSANSGSCLINLKDWKHRKRTAKEIISDLEQKCKSITQA
NIDFFEPPSIPGYGAASGFELRLLDKTGKNDYHEMEHVSKAFVAELNKRPEIGNAFTFYS
ASFPQYMLHVDDSKALQKGVKPGKALNNLSVLVGSDYQTGFIRFGKPYKVIVQAAPQYRD
FPNHLLALYSKNESGEMVPYSDFMSLSKTYGMSEITRHNLYNSSEVTGAQAPGYSSGQAL
QAIQEVAQSSLPKGYDYDWAGISKDEAEQGNTAIIIFIVCLVFVYLILAAQYENFLLPLP
VIVFLPVGIFGAFLFLKACSLENNIYAQIALVMLIGLLGKNAVLMVEYAVQRKNAGESID
QAAISAAAARFRPILMTSIAFIAGLIPLVFASGAGAIGNRTIGTAAVGGMIIGTLGGLLL
IPGLYYIFAGMTDKLVHYQKDKPLSEEKDKRYTKKKINERKHDDEE
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagatctttattcgtaggccagtgctctcaattgtagtatcactggtcattgcc
tttattggcatactatcactttccaatctacctatcacgcagtttccatccatctctcct
ccaaaggtcaatgtgattgctaactatcctggtgccaataatgagttgctggtaaagtcg
gtcatcattccgttggagcaagccttgaatggtattcctggtatgaaatacatagaaagc
gatgctggtaacgatggcgaggcagagctaaacgtcgtgtttaagttgggtactgacccc
aatgtcgatgcggtaaatgttcagaaccgtgtgtcttctgctacaaataaattgccacct
gaagtcattcgagaaggtgtaaagatatcacgtgaagagccaaacatacttatgtatatc
aatctttacagtgatgatcctgaggttgatcagagctttctgtacaactactttgatatc
aacatatctccagagttgttacgtgtagatggtgttggcgatttggatattcttggtacg
cgtaactatgctatgcgtgtgtggttacatccagacaagatggtagcttatggattgtca
actgatgacgtcagtgatgcacttgaagatcagaatatagaggtgtcaccaggaaagtta
ggtgagagcggaggtataagaccacaggttaaagagtatgttttgaaatatccagggcgt
tataccagtgaagaggaatataagaatatcatcgttaaaagcgataataatggaaatatc
gtacgcttaaaagatattgccgacgtacatttaggaagtgaagtatatgatatctactcc
accttcaatggtcgtccttcagctgctgttacgttgaaacaagcgtatggtagtaatgca
cgtaatgtcatcagcaaggttaaggatgcgatgtcgcatctacaaaaagacatgccaaag
ggaatgcactatgaaatcagctacgatgtgagcagattcttggatgcaagtattgagaaa
gtaatacacaccctgtttgaagccttcatcttagtggctattgtggtattcatcttctta
ggcgattggcgtgcctcaattattccgattatggctgtcccgatatcattattgggcagt
tttattgcgatgatgttattcaacataacgctcaacatgatttccctctttgccttggtt
atggccattggtattgtggtggatgatgctattgtcgtgattgaagctgtaaatgtagaa
atctcacgcaataatcttacgcctatcgaagccacagaaaaagccatgaaggaaatcagt
ggtgccattatcgccatctccttggtaatggcgtcggtctttatccctgttgcgttcatg
ggtggtccagaaggtatgttctatcgtcagttctccatcacaatggcatcaagcatcctt
ttctctggctttgttgcactgactttaactccagctttgtgtgcgcttattctgacaaag
gaacaagaaaacaatgtgaagttgggtattgtaggacgtgttcttaagcgatttaatgcg
aagtttgatactggtcgtagcagatacgaacacatcattgaacatacagtaaagaagaag
gcgtttaccatcattctgattttggcattctgtggtttagcttattggataaaccttgga
cttccatctggtttcattccacaagaagaccaaggaatgatttatgcagtgatagagacg
cctcctagtgctacgattgaacgcacgaatgctgtggcacaaaagctccttaagattgcc
gaaaaagaacaggatgtagaaagtgtttcgtcgttagcaggcttcgaaatcctttctgag
ggtacgagtgctaactctggaagttgcttgataaacctcaaagactggaaacatcggaaa
cgaacagcgaaagagattatcagcgacttagaacagaaatgtaagagcatcacgcaagca
aacatagatttctttgagccaccatcaataccaggttatggagccgctagtggattcgaa
cttcgtttgttggataaaacgggtaaaaacgattatcacgagatggaacatgtgagcaaa
gcgtttgttgcagaattaaacaaacgtcctgaaatagggaatgccttcacattttactca
gcaagcttcccacaatatatgcttcatgttgatgacagcaaagctttacaaaaaggtgtc
aagccgggtaaagcattaaacaacctatccgtgttggtaggttcggattatcagacaggg
tttattcgctttggtaaaccttacaaggtgattgtgcaggctgctcctcaatatcgtgac
ttccccaaccatttgttggcgttatatagtaagaatgagagtggagagatggtgccttat
tctgactttatgtcgctttcaaagacctacggtatgagtgagattactcgtcataatctt
tataactcatccgaggtgacaggtgcacaagctcctggatattcaagtggacaagctttg
caggccattcaagaggttgcgcaaagctcactgccgaaagggtatgattatgattgggcg
ggtatatcaaaagatgaagcagagcaaggtaacacggcgattatcatattcatcgtctgt
cttgtctttgtctatcttattctggctgcacaatatgagaatttcctcctcccattgcct
gtaatcgtattcctcccggtgggtatctttggcgccttcctctttttgaaggcttgtagc
ttagagaacaatatctatgcacaaatagcgctggtgatgcttattggtttgttaggaaag
aatgccgtcttgatggtggaatatgcagttcagcgtaagaatgccggagaaagcatagac
caagcagctatttcggctgctgctgcacgtttccgtcctatcctcatgacgagtattgcc
ttcattgctggtttgattccattggtgtttgcctctggtgctggtgctattggtaaccga
acaattggaactgctgctgtcggtggtatgattatcggtaccttaggcggattgttgcta
atccctggtctttactacatctttgctggaatgactgacaaactggtacattaccagaaa
gataagcccttgagtgaagaaaaagataaacgttacacaaagaagaaaataaacgaaaga
aaacatgatgatgaagaataa
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