Prevotella scopos: J4856_03310
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Entry
J4856_03310 CDS
T08373
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pscj
Prevotella scopos
Pathway
pscj01501
beta-Lactam resistance
pscj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J4856_03310
01503 Cationic antimicrobial peptide (CAMP) resistance
J4856_03310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pscj03036
]
J4856_03310
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pscj02000
]
J4856_03310
01504 Antimicrobial resistance genes [BR:
pscj01504
]
J4856_03310
Chromosome and associated proteins [BR:
pscj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J4856_03310
Transporters [BR:
pscj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J4856_03310
Antimicrobial resistance genes [BR:
pscj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J4856_03310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QUB44053
LinkDB
All DBs
Position
1:complement(868681..869760)
Genome browser
AA seq
359 aa
AA seq
DB search
MKKLFQLSCLAVIFLLCACHSKKETEVKSVYTATTPLVETISLPRSYVANIASQQNIEIH
SQQTGILQNVYVSEGQYVRAGQPLFRIAIVGAEEEIAKAKAAAEQASIDLQNVTNLTDNK
VLSNNAKRMAVAKLKGAEADYKLAVLHKRLSLIRAPFSGILGRIPNKRGSLVDPSDLLTS
LSDNKKVLVYFNVSETDYLDFRLHPERFSNNPLQLVLANGDVFPARGKMLDIGGQFDSST
GTIAIRAIFDNPNNLLRNGETGTVKLFVSKKDALLIPQEAVYELQDQKYVFVVDKHNVVH
QRAIKIDSEITGAYVVSSGLQATDRYLVDGIQKVNDGDKVSISMVSPQAAMKLDKLNAD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatttcaactgtcttgtcttgcagtcatatttcttttatgcgcttgtcat
tcaaagaaagaaacagaagtaaaatcagtttacacggcaacgactccattggtagaaacc
atctctctgccacgttcctatgttgccaacatcgcttcacaacaaaacattgaaatccat
tcgcaacaaacaggtatcttacaaaatgtttatgttagtgagggacaatatgtaagagcg
ggacaaccacttttccgtattgcaattgttggtgctgaagaagagattgcgaaggctaaa
gctgcagcagaacaagcgagtatcgatttgcagaatgttacgaaccttaccgataataag
gtgctatcaaataatgccaaacgcatggcagtggctaaattgaaaggggcagaagccgat
tataagttagctgtattgcacaaacgtctttctctcattcgagctcctttctcgggtatt
ttaggtcgcatccctaacaaaagagggagtttggtagatcccagcgacttacttaccagt
ttgtcagacaataagaaggtacttgtttattttaatgtttctgaaacagactatttagat
tttcgtctgcatccggagcgtttctcaaacaaccccttacagcttgtattggcaaatggt
gacgtctttcctgcaaggggaaagatgttagatattggtggacagtttgatagttcaact
ggaacaattgccattcgcgctatctttgacaaccccaacaaccttttacgcaatggcgaa
acaggtacggtgaaactctttgtatctaaaaaggatgctctcttgattcctcaagaagca
gtttatgagttacaagatcaaaaatatgttttcgtagtagataaacataacgttgtacat
caacgtgcgataaagatagatagtgaaatcacaggagcttatgttgtctcctcaggtttg
caagctaccgaccgatatcttgtcgatggaatacaaaaagttaatgatggcgacaaggta
agcatctcaatggtatctccgcaagccgcaatgaagttggataaactaaacgctgattag
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