KEGG   Mollisia scopiformis: LY89DRAFT_682941
Entry
LY89DRAFT_682941  CDS       T04865                                 
Name
(RefSeq) ABC transporter
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
psco  Mollisia scopiformis
Pathway
psco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY89DRAFT_682941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_682941
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     LY89DRAFT_682941
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 AAA_15 AAA_23 PduV-EutP RsgA_GTPase ORC-CDC6-like DUF3584 AAA_22 AAA_28 AAA_25 Arf AAA_13 AAA_14 SRP54 NACHT
Other DBs
NCBI-GeneID: 28824332
NCBI-ProteinID: XP_018074519
JGI: 682941
UniProt: A0A194XJ61
LinkDB
Position
Unknown
AA seq 296 aa
MSTTTHTTEEIDQTKAPSIHLTNLSYTFPSTHSGLSNLTLSLPPKSRTLLIGANGAGKTT
LLRLLSGKRLAPSNTISIGGLDPFKDGLEGVTYLGLEWVLNPIVRTDIGVKELLKSVGGD
HYPDRKDELVRVLDIDLDWRMHAVSDGERRRVQLAMGLIRPWRILLLDEITVDLDLLSRS
NFLAFLKKETETRECTIVYATHILDNLAEWPTHLVHMSLGKVKEWGEIEGFELGEKGYGK
TGNSRLGELVLGWLKDDLRERGPRNKGTTSEGTAYLTGGLGGYGAEDAIKAGKRTF
NT seq 891 nt   +upstreamnt  +downstreamnt
atgtccaccaccacccacaccaccgaagaaatagaccaaacaaaagccccctcaatccac
ctaacaaacctctcctacaccttccccagcacccactccggcctctcgaacctaaccctc
tccctcccccccaaatcccgcaccctcctcatcggcgccaacggcgccggcaaaaccacc
ctcctccgcctgctctccggcaagcgtctcgcgccctcaaacaccatctccatcggcggc
ctcgaccccttcaaagacggcctcgagggcgtgacatacctcgggctcgaatgggtgctc
aatcccatcgtacgaaccgacatcggtgtcaaggaactactgaagagcgttggtggggat
cattaccccgatcggaaagacgagttggtgcgcgttcttgatattgatctggattggcgg
atgcatgcagtatcagatggggagagaaggagggtccagcttgccatgggacttattcga
ccttggcgaatcttgttgttggacgagattacggtggatttggatctattaagtcggagt
aatttcctagctttcctgaaaaaggagactgagacgagggagtgtaccattgtgtacgcg
acgcatatcctggataacctggcggagtggccgacgcatctggtgcatatgagtctgggg
aaggttaaggagtggggtgagatcgaggggttcgagttgggcgagaaggggtatgggaag
acggggaatagtaggttgggagaattggttttggggtggttgaaggatgatttgcgtgag
agggggcctaggaataaagggacgacgagtgaggggactgcgtatttgacgggtggtctt
ggggggtatggggcggaggatgctattaaggccggcaaaaggactttttaa

DBGET integrated database retrieval system