Pseudochrobactrum algeriensis: KHQ08_09810
Help
Entry
KHQ08_09810 CDS
T07380
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pscq
Pseudochrobactrum algeriensis
Pathway
pscq01501
beta-Lactam resistance
pscq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pscq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KHQ08_09810
01503 Cationic antimicrobial peptide (CAMP) resistance
KHQ08_09810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pscq02000
]
KHQ08_09810
01504 Antimicrobial resistance genes [BR:
pscq01504
]
KHQ08_09810
Transporters [BR:
pscq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KHQ08_09810
Antimicrobial resistance genes [BR:
pscq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KHQ08_09810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Ykof
Motif
Other DBs
NCBI-ProteinID:
QVQ38244
LinkDB
All DBs
Position
complement(1704045..1707137)
Genome browser
AA seq
1030 aa
AA seq
DB search
MSFSDSFIRRPVLSIVVALMIILLGLQGIFNLSVRQYPEVDETVITVTTAYAGASAELIQ
GFITAPIAKAVATTENVDYVTSKSSQSLSTVTVQMKLGANPDAALTEVISKVNQVRGDLP
SESEDPVISKGTGQSFATMYLAVQNPNMTNEQITEYIDRVIRPRMSTIEGVADAQILGGQ
EYSMRVWVDPIRMAARNVTASEVLAAIKASNFLSAPGKTKNEYFATAITLRSTLQTPEAF
AEMPIRAEGSDIIRMRDVANVELAAKSTDTVVTFNGSSGTFIGVFPTPSANPIDMATAVN
KELPSIQDSLPQGMNIILVYDATEQISSSIVEVFKTIAEAMIIVVIVILLFLGSFRSVLI
PIVTIPISLIGVCFFLFILGFSINLLSLLAMVLAIGLVVDDAIVVLENIHRHIEEGLTPI
HASFVGMKEITSSIVAMTITLAAVFAPLGFTGGLTGSLFREFAFTLAGAVILSGVAALTI
SPMMCSRMLKHGEASRFAQFVDRLFTRFENGYERWVSGSLNYRPITMLVVVSLVGVMGFL
FVNTSSELAPEEDSGALFSMFSGPKYATSDYTKLYADQIDELTKDLPELKARFNIVGFGS
ATNEGIALWALKDWSQRDRSQKQIQEDLTKRIKDVTGVQAFIFAPPSLPGTGGGLPISIA
IQSTGSSDQVFEISEEIKNEAQASGQFIIVQNSLSFNSPQTTIEVDRERASAMGVTVSEI
GATLGLMTGGGKVAQFDRDNNSYDIIMQVPDEYRRNPSKLGEFYVRSASGEMVPLSAVVK
IVNQASPTAIEQFNQLNSSTISALPLPGVTTGDGLKTILDIANAKLPEGFFIDYSGQSRL
EIEQGNTILIAFSLAVVVIYLVLAAQFESFRDPFIIMMTVPLSIFGAIVPLNLGLGTLNI
YTQVGLITLVGLITKHGILMVEFANQQRHEHGLSRHDAIIASAKTRLRPILMTTAAMALG
VVPLMMATGAGAAARYSMGLVIFTGLMVGTMFTLFVVPMFYTLISAKTVKPLVSVPTEEE
LKAEVQSAHH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttctgatagttttatacgcaggccggttctttcgattgttgttgcgctgatg
attatcctgcttggtttgcagggaattttcaatctgtcagtgcggcagtatccggaagtg
gacgaaacggttattaccgttacgaccgcctatgccggtgccagcgcggagctcattcag
ggcttcatcaccgcgcctattgcgaaagcagtggcgacgactgaaaatgttgactatgtg
acttccaaaagtagccagtcactcagcactgttacggttcagatgaagctcggggctaat
cccgatgcggcgctgacagaggttatctccaaggtcaatcaggttcgcggcgatctgccg
agtgaatcggaagatccggtcatctccaaaggtaccggtcagtcctttgcgaccatgtat
ctggccgttcagaacccgaatatgaccaatgagcagattacggaatatattgaccgcgtg
atccgtccgcgcatgtccaccattgaaggtgtggctgatgcgcagatcctcggtggtcag
gaatattccatgcgcgtatgggttgatcctatccgtatggctgcccgtaatgtgacagct
tcggaagtgctggctgcgattaaagcatccaacttcctgtcggcaccgggtaaaacaaag
aacgaatatttcgcaactgcgattaccctgcgttccactttgcagacgcctgaggctttt
gcggagatgccgatccgtgcggaaggttccgatattatccgtatgcgcgatgttgccaat
gttgaactggcagcaaagagcacggatactgttgtgactttcaacggctccagcggtaca
tttatcggtgtgttcccgacgccttcggctaacccgattgacatggcaacagccgtgaac
aaggaactgccgagcattcaggacagcctgccgcagggcatgaacatcattctggtttat
gatgcgaccgagcagatttcttcttcgattgttgaggttttcaaaacaattgcagaagcg
atgattatcgttgttattgtgatcctgctgttccttggttcgttccgttcggttctgatc
ccgattgttaccattccgatctcgctgatcggtgtgtgtttcttcctgttcattctcgga
ttctcgatcaatcttctgtccttgctggcgatggttcttgccatcggtctggtggtggat
gacgcgattgtggtgcttgagaatattcaccgccatattgaagaaggtctgacaccgatc
catgcatcctttgtgggcatgaaggaaatcacatcttccatcgtggcgatgacgattaca
ctggctgcggtgtttgcaccgctcggctttaccggtggtctgaccggttcgctgttccgt
gaatttgcgttcacacttgccggtgcggttattctgtccggtgtggcggcgctgaccatc
tctccgatgatgtgttcgcgcatgctgaaacatggtgaagccagccgctttgcccagttt
gtagaccgtttgttcacccgttttgaaaacggctatgaacgctgggtttccggttctctg
aactatcgtccgatcaccatgctggtcgttgtgtctctggttggtgttatgggcttcctg
ttcgtgaacacctcatcggaactggctcctgaagaagattccggtgcgctgttctcgatg
ttcagcggccctaaatatgcgacatcagactataccaagctttatgcagaccagatcgat
gaactgacaaaagatctgcctgaactgaaagcccgttttaacattgtcggtttcggcagt
gcgacaaatgaaggtattgctctgtgggcattgaaagactggtcgcagcgtgaccgttcg
cagaagcagattcaggaagacctgaccaagcgtattaaagatgtgaccggcgtacaggcc
ttcatctttgctccgccgtcgctgccgggtaccggtggtggtctgccgatttcgatcgct
atccagtcgacaggttcgtcggatcaggttttcgaaatttctgaggaaatcaagaatgaa
gcgcaggcttcgggacagttcatcattgttcagaactccctgtcgttcaattctccgcag
acaacgattgaagttgaccgtgaacgtgcatccgcaatgggtgtgactgtcagcgaaatc
ggtgcgaccctcggtctgatgaccggtggtggtaaggttgctcagttcgaccgtgataat
aacagctatgatattatcatgcaggtgccggatgagtatcgccgcaatccgtccaagctc
ggtgaattctatgttcgcagtgcttcgggtgagatggtgccgctgtctgccgtggtgaag
attgtaaatcaggcttccccgactgcaattgaacagttcaaccagctgaactcctcaaca
atttcggctctgcctctgccaggtgttacaaccggtgacggtctgaaaacgatccttgat
attgccaatgccaagctgcctgaaggcttcttcattgactattcggggcagtcgcgtctg
gaaatcgagcagggtaatacaatcctgatcgccttctcgctggctgttgttgtgatttat
ctggtgttggctgcacagttcgaaagcttccgcgatccgttcatcattatgatgaccgtt
ccgctgtcgattttcggtgcgatcgtgccgctgaaccttggtctcggtacgctgaatatc
tatacgcaggttggtctgattacccttgtggggctgattaccaagcatggtattctgatg
gtggaattcgccaatcagcagcgccatgaacatggactgagccgtcacgatgcgattatc
gcttcggctaaaacccgtctgcgtccgatcctgatgacaactgcagctatggcgctcggc
gttgtgccgctgatgatggcaaccggtgccggtgcggcagcgcgttactccatgggtctg
gtgatcttcaccggtctgatggtcggtacaatgttcaccctttttgtggtgccgatgttc
tacacgctgatctctgcgaagaccgttaaacctctggtttcggttcctacagaggaagag
ctgaaggcggaagtgcagtctgcccatcactaa
DBGET
integrated database retrieval system
