Pseudonocardia sp. DSM 110487: K1T35_46320
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Entry
K1T35_46320 CDS
T10356
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K1T35_46320 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_46320 (nth)
Enzymes [BR:
psds01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K1T35_46320 (nth)
DNA repair and recombination proteins [BR:
psds03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K1T35_46320 (nth)
Prokaryotic type
K1T35_46320 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QYN40928
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All DBs
Position
9916460..9917191
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AA seq
243 aa
AA seq
DB search
MLRTLAATHPDAHCELDFTTPLELAVATILSAQSTDKLVNSVTPALFRRYPTALDYAQAD
RAELEEMIHSTGFFRNKANSLIGMGSAVVEKHDGVLPHTLEELVALPGIGRKTANVILGN
AYGIPGITVDTHFGRLVRRWGWTQEDDPVKVEHAIGAMVPKRDWTMVSHYVIFHGRRVCH
ARKPACGACTLSADCPTFGAGPMDPVQAAALVKGPSRTHLLAMVGIPDDDAPPAAGGEDA
DAP
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcacgctggccgccacccaccccgacgcccactgcgagctcgacttcaccaca
ccgctcgagctcgccgtggccacgatcctgtcggcgcagtccaccgacaagttggtcaac
tccgtcacaccggcgctcttccggcgctaccccaccgcgctcgactacgcgcaggccgac
cgcgccgagctggaggagatgatccacagcaccggcttcttccggaacaaggccaactcg
ctgatcgggatgggcagtgccgtcgtcgagaagcacgacggcgtactcccgcacacgctc
gaggagctcgtcgcactccctgggatcggccgcaagaccgccaacgtgatcctcggcaac
gcgtacggcatccccggcatcacggtcgacacccacttcggtcgcctggtgcggcgctgg
ggctggacccaggaagacgacccggtcaaggtcgagcacgcgatcggcgcgatggtgccc
aagcgcgactggacgatggtgtcccactacgtgatcttccatggcaggcgcgtgtgccat
gcccgcaagccggcgtgcggcgcgtgcacgctctccgccgactgccccacgttcggcgca
ggccccatggatcccgtgcaggccgccgccctcgtgaagggcccctcacgcacccacctg
ctcgccatggtcggcatccccgacgacgacgcacctcccgccgcaggcggcgaggacgcc
gacgcaccgtga
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