Pseudomonas sp. Stari2: NH234_14540
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Entry
NH234_14540 CDS
T10554
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt01501
beta-Lactam resistance
psdt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NH234_14540
01503 Cationic antimicrobial peptide (CAMP) resistance
NH234_14540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_14540
01504 Antimicrobial resistance genes [BR:
psdt01504
]
NH234_14540
Transporters [BR:
psdt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NH234_14540
Antimicrobial resistance genes [BR:
psdt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NH234_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ParB_C
Motif
Other DBs
NCBI-ProteinID:
XCX97597
LinkDB
All DBs
Position
complement(3232101..3235199)
Genome browser
AA seq
1032 aa
AA seq
DB search
MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPDVAPPQIEIYAVYPGASAQTVDES
VVSLIEEELNGADHLLYFESQSSLGSATIKATFQPGTNPELAQVDVQNRLKVVESRLPQA
VNQQGLQVEKVSAGFLLLITLTSSDGKLDDVALSDYLARNVMNEIKRIDGVGKAQLYGAE
RAMRIWVDPQKLIGFNLTPADVNAAIVAQNAQVSAGSIGDLPNPSTQEITATILVKGQLS
TPEEFADIVLKANPDGSTVRIKDVARVEIGSQEYQFGTRLNGKPSTAVGVQLAPGANALS
TATLIRAKMDELSRYFPAGVEYKIPYDTSPFVKVSITKVVYTLGEAMLLVFAVMFLFLQN
IRYTLIPTLVVPVALMGTFATMLALGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMA
TEGLSPKEATRKAMRQITGAIIGITLVLVAVFIPMAFMQGSVGVIYRQFSLSMATSILFS
AFLALTLTPALCATLLKPIAKGEHHEKNGVFGWFNRRFEWLTNRYQDWVGYALKRTGRYL
LIYVVLLVGLGLCFARLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVVEQIEAHNAGEP
GVGDSTVILGFSFSGSGQNAALAFTTLKDWSQRGGDDSASSIADRANIALSQIKDAVAFA
VLPPPVDGLGTSSGFEFRLQDRGGLGHATLMEARTQLLEAAEKSPILMNVRESALAEAPQ
VQLEVDRKQANALGVSFADVGNVLSTAIGSSYVNDFPNQGRMQRVVVQAEGDRRSQVDDL
LKMHVRNDAGKMVPLSAFVRATWTQGPAQLTRYNGYPAISISGEPKPGHSTGEAMAEIER
LVAQGPKGLGQEWTGLSLQERLSGSQAPILLGLSLLIVFLCLAALYESWSIPTSVLLVVP
LGVLGAVLAVTLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKSLYDEGHDLIDATLQA
ARLRLRPIVMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVIFVPVFFVV
VIKLVRRFAKPD
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttctttatcgaccgcccggtgttcgcctgggtcgtcgcgttgttcatcctg
ttggccggtgcgctggccatcccgcaattgccggtggcgcaataccccgatgtcgcaccg
ccgcagatcgaaatctatgccgtgtacccgggtgcctcggcgcagaccgtcgacgagagc
gtggtcagcctgatcgaggaagagctcaacggcgccgatcacctgctgtatttcgaatcg
cagagcagcctcggcagcgccacgatcaaggcgacgttccagcccggcaccaacccggaa
ctggcgcaggtcgatgtacaaaaccgcctgaaagtggtcgagtcgcgcctgccgcaagcg
gtcaatcagcaaggcttgcaggtggagaaagtctccgccggtttcctgctgctgatcacc
ctgacctccagtgacggcaaacttgacgacgtagcgctcagcgattacctggcgcgcaac
gtgatgaacgagatcaaacgcatcgacggcgtcggcaaggcccagttgtatggcgccgag
cgggcgatgcggatctgggtcgacccgcagaagctgatcggtttcaacctgacgccagct
gatgtcaacgccgccatcgtcgcgcagaacgctcaggtctcggcgggcagcattggcgat
ctgccaaacccgagcactcaggaaatcaccgcgacgattctggtcaagggacaactgtcg
acgccggaagagttcgccgacatcgtgctcaaggccaatccggacggttccaccgtgcgc
atcaaggatgtggcgcgggtcgagatcggcagtcaggaataccagttcggcacccgtctg
aacggcaagccgtccaccgccgtcggcgtgcaactggcaccgggcgccaatgccctcagt
accgcgactttgatccgggcgaagatggatgagctgtcgcgttatttcccggcgggcgtg
gaatacaagattccctacgacacttcgccattcgtgaaggtctcgatcaccaaagtggtc
tacaccctcggcgaagccatgttgctggtgttcgcggtgatgttcctgttcctgcagaac
atccgctacacactgatcccgacgctggtggtgccggtggcgttgatgggcaccttcgcg
accatgctcgcgctggggttctcgatcaacgtgctgaccatgttcggtatggtgctggcg
atcggcattctggtggacgacgccattgtggtggtggagaacgtcgaacggatcatggcc
accgaaggcctgtcgcccaaagaggcgactcgcaaagcgatgcggcagattaccggcgcg
atcatcggcatcacgctggtgctggtggccgtgttcattccgatggcattcatgcagggc
tcggtgggcgtcatctatcgccagttctcgctgtcgatggcgacttcgatcctgttctcg
gcgttcctcgccctgaccttgaccccggcgttgtgcgcaacgctgctcaagccaatcgcc
aaaggtgagcatcacgagaaaaacggggtcttcggctggttcaaccgccgcttcgagtgg
ctgacgaatcgctatcaggactgggtcggctatgcgctgaaacgcaccggtcgttatctg
ctgatctacgttgtgttgctggtgggtctgggcctgtgcttcgcgcgcctgccctcttcg
ttcctgccggtcgaggatcagggttacaccatcaccgacattcaattgccacccggtgcg
agcaagaaccgtacggtgcaggtggtcgagcagatcgaagcgcacaacgccggcgaaccg
ggtgtgggcgacagcaccgtgatactcggcttcagcttctccggcagcgggcagaacgct
gcgctggccttcaccacactcaaggattggtcgcaacgtggcggcgacgattcagcgagc
tcgattgccgaccgtgcgaacatcgccctgagtcagatcaaggatgccgtggctttcgcc
gtgctgccgccgccggtggacggtctcggtacgtccagcggtttcgagttccgcctgcag
gatcgcggtggcctcggtcatgcgactttgatggaggcacgcacccaacttctggaagcc
gccgagaaaagcccgatcctgatgaacgtgcgtgaaagcgcgctggccgaagcaccgcaa
gtgcaactggaagtggaccgcaagcaggccaacgccttgggagtttcgttcgccgacgtc
ggtaacgtgctgtccaccgccatcggctcctcgtacgtcaacgacttccccaatcagggt
cggatgcaacgggttgtcgtgcaggctgaaggtgatcgccgcagtcaggtcgatgacttg
ctgaaaatgcacgtacgcaacgacgccggaaaaatggtgccactgtcggcgttcgtccga
gccacatggactcagggcccggcgcaactgacccgctacaacggctatccggcgatctcg
atttccggcgaaccgaaacccggtcacagcaccggcgaagccatggcggagatcgaacgg
ctggtggcccaagggccgaaagggctgggtcaggaatggacagggctgtcgttgcaggag
cgtttgtccggcagtcaggcgccaatcctgctcgggttgtcgctgttgatcgtgttcctg
tgtctggcggctttgtacgagagctggtcgattccgacttcggtgctgctcgttgtgccg
ctgggtgtactcggtgcagtgctggcagtgaccttgcgtgggatgcccaacgacgtgttc
ttcaaggtcggcctgatcaccatcatcggattgtcggcgaaaaacgcgatcctgatcatc
gagtttgccaagagcctgtatgacgaaggtcacgatctgattgacgccacgctgcaagct
gcgcgtctgcggttgcggccgattgtcatgacttcgctagcgttcattctgggcgtggta
ccgctggcgattgccacgggcgcgagttcggcgagtcagcaggcgattggtaccggggtg
attggcgggatgattacggcgacgctcgcggtgatctttgtgccggtgtttttcgttgtc
gtgatcaagcttgtgcgcaggtttgccaagcctgattga
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