Pseudomonas sp. Stari2: NH234_17565
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Entry
NH234_17565 CDS
T10554
Name
(GenBank) pyridoxal-phosphate dependent enzyme
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00260
Glycine, serine and threonine metabolism
psdt00270
Cysteine and methionine metabolism
psdt00670
One carbon pool by folate
psdt01100
Metabolic pathways
psdt01110
Biosynthesis of secondary metabolites
psdt01230
Biosynthesis of amino acids
Module
psdt_M00035
Methionine degradation
psdt_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH234_17565
00270 Cysteine and methionine metabolism
NH234_17565
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NH234_17565
Enzymes [BR:
psdt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
NH234_17565
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GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-ProteinID:
XCX98159
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All DBs
Position
3891090..3892466
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AA seq
458 aa
AA seq
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MSKESRPAVLGLIGNTPLVQVTRFDTGLCTLFLKLESQNPGGSIKDRIGLAMIDAAERDG
RLQPGGTIVEATAGNTGLGLALVGRAKGYRVVLVVPDKMSTEKVLHLKAMGAEVHITRSD
VGKGHPEYYQDVAARLAKDIPGAFFADQFNNPANPLAHECSTAPEIWAQTEHDLDAIVVG
VGSAGTLTGLTRFFKRVQPDLEMVLADPVGSVMAEYSRSKHLGTAGSWAVEGIGEDFIPS
ITDLSSVRSAYSISDEESFDHARQLLRSEGILGGSSTGTLLAAALRYCREQTVPKRVVSF
VCDTGTRYLSKVYNDQWMTDQGLLQRKRYGDLRDLIARRFEDGKVVSVGPDDTLMTAFQR
MRLADVSQLPVLVEGKQLVGVIDESDILVRVHEDATLFSKPVASAMTDKLQTLAPAATLA
ELEAVLSSGLVAIIADASGFHGLITRVDMLNQLRRSLA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaatcacgccctgccgtacttgggctgatcggcaatactccgctggtacaa
gtcacccgcttcgataccggtctgtgcactctgtttctcaagctcgaatcccagaacccc
ggcggctcgatcaaggatcgtatcggcctggcgatgatcgacgccgccgagcgcgacggt
cgcctgcaacccggtggcaccatcgttgaagccactgccggcaacaccggcctgggcctg
gcattggtaggccgcgccaagggctaccgcgtcgtgctggtggtgccggacaagatgtcc
acggaaaaagtcctgcacctcaaggccatgggcgccgaagtgcacatcacccgctccgat
gtcggcaagggccaccccgagtattaccaggacgtcgccgcccgtctggcgaaagacatc
cccggcgcattcttcgccgaccagttcaacaaccccgccaacccgctggcccacgaatgc
agcaccgcgccggaaatctgggcgcaaaccgagcatgatctggatgccatcgtggtcggc
gtcggttccgccggtacgctgaccggcctgacccgtttcttcaaacgcgtacaaccagac
ctcgagatggtcctggccgacccggtcggttcggtcatggctgaatacagccgcagcaag
cacctcggcactgccggttcgtgggcggtggaaggcatcggcgaagacttcattccgtcg
atcaccgacctgtcgagcgtgcgcagcgcctactcgatcagcgacgaagaaagcttcgat
cacgcccgccagttgctgcgttccgagggcattctcggtggttcgtccaccggcaccctg
ctcgctgccgcgctgcgttactgccgtgagcagactgtgccgaaacgtgtggtcagcttc
gtctgcgacaccggtactcgctacctgtcgaaggtctacaacgaccagtggatgaccgat
cagggcctgttgcagcgcaaacgctacggcgatttgcgcgacctcattgcccgtcgcttc
gaagacggcaaagtggtcagcgtcggcccggacgacaccctgatgaccgcgttccaacgc
atgcgcctggcggatgtttcgcaactgccggtgctggtggaaggcaaacaactggtcggc
gtgatcgacgaatcggacatcctggtgcgcgtacacgaagatgccacgctcttcagcaaa
cccgtcgccagcgcgatgacggacaaactgcaaaccctcgcccccgccgcgaccctggct
gaactggaagccgtgctcagcagcggcctggtggcgatcattgccgacgcctcgggcttc
cacggcctgatcacccgcgtcgacatgctcaaccaactacggagatcccttgcatga
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