Pseudomonas sp. Stari2: NH234_23785
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Entry
NH234_23785 CDS
T10554
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NH234_23785 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psdt03400
]
NH234_23785 (nth)
Enzymes [BR:
psdt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NH234_23785 (nth)
DNA repair and recombination proteins [BR:
psdt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NH234_23785 (nth)
Prokaryotic type
NH234_23785 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
XCX99332
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All DBs
Position
5196308..5196946
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLYPVANT
PAAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRLLVERHNGEVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIAPGKNVVEVENKLMKFVPKQYLLDSHHWLI
LHGRYVCLARKPRCGSCRIEDLCEYKDKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcaaaacgtctggagattttccgcaggcttcacgaggacaatcctgaaccc
aagaccgaactggcctattcctcgcctttcgaattgctgatcgcggtgattctgtccgcc
caatcaactgacgtcggggtgaacaaggcgacggcgaaactttacccggtggccaacaca
ccggccgccattcatgccttgggcgtcgaagggttgtccgagtacatcaagaccatcggc
ctctataacagcaaggcgaaaaacgtgatcgaaacgtgccgtctgctggtcgaacgccac
aatggcgaagtcccgcagacgcgcgaagcgctggaagccctgcccggcgttggtcgaaaa
accgccaacgtagtactcaacacggcgttccgtcaattgacgatggcggtggacacccac
atttttcgggtcagcaaccgcaccggcattgcgccgggcaagaacgtggtcgaggtggag
aacaaactgatgaagtttgtaccaaagcaatacctgctcgattcgcaccactggcttatt
cttcacgggcgttatgtatgcctggcccgcaagccgcggtgcggtagctgtcggatcgaa
gacttgtgtgaatacaaggacaaaacttctgacgattga
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